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Cellosaurus UKE-1 (CVCL_0104)

Cell line name UKE-1
Synonyms UKE1; GM23245
Accession CVCL_0104
Resource Identification Initiative To cite this cell line use: UKE-1 (RRID:CVCL_0104)
Comments Omics: Deep exome analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis by microarray.
Omics: Transcriptome analysis by RNAseq.
Donor information: Patient had a essential thrombocythemia transformed into acute leukemia.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Sequence variations
  • Mutation; HGNC; 6192; JAK2; Simple; p.Val617Phe (c.1849G>T); ClinVar=VCV000014662; Zygosity=Homozygous (PubMed=16408098).
HLA typing Source: PubMed=26589293
Class I
HLA-AA*02:01,03:01
HLA-BB*07:02,35:03
HLA-CC*04:01,07:02
Class II
HLA-DQDQA1*01:02,04:01
DQB1*04:01,06:02
HLA-DRDRB1*08:01,15:01
Disease Essential thrombocythemia (NCIt: C3407)
Essential thrombocythemia (ORDO: Orphanet_3318)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_4Z62 (UKE-1/TGR)
Sex of cell Female
Age at sampling 59Y
Category Cancer cell line
Publications

PubMed=10640966; DOI=10.1002/(SICI)1097-0142(20000115)88:2<344::AID-CNCR14>3.0.CO;2-6
Fiedler W., Henke R.P., Ergun S., Schumacher U., Gehling U.M., Vohwinkel G., Kilic N., Hossfeld D.K.
Derivation of a new hematopoietic cell line with endothelial features from a patient with transformed myeloproliferative syndrome: a case report.
Cancer 88:344-351(2000)

PubMed=16408098; DOI=10.1038/sj.leu.2404081
Quentmeier H., MacLeod R.A.F., Zaborski M., Drexler H.G.
JAK2 V617F tyrosine kinase mutation in cell lines derived from myeloproliferative disorders.
Leukemia 20:471-476(2006)

PubMed=22829968; DOI=10.1038/bcj.2012.11
Buors C., Douet-Guilbert N., Morel F., Lecucq L., Cassinat B., Ugo V.
Clonal evolution in UKE-1 cell line leading to an increase in JAK2 copy number.
Blood Cancer J. 2:e66.1-e66.3(2012)

PubMed=25485619; DOI=10.1038/nbt.3080
Klijn C., Durinck S., Stawiski E.W., Haverty P.M., Jiang Z.-S., Liu H.-B., Degenhardt J., Mayba O., Gnad F., Liu J.-F., Pau G., Reeder J., Cao Y., Mukhyala K., Selvaraj S.K., Yu M.-M., Zynda G.J., Brauer M.J., Wu T.D., Gentleman R.C., Manning G., Yauch R.L., Bourgon R., Stokoe D., Modrusan Z., Neve R.M., de Sauvage F.J., Settleman J., Seshagiri S., Zhang Z.-M.
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

PubMed=26589293; DOI=10.1186/s13073-015-0240-5
Scholtalbers J., Boegel S., Bukur T., Byl M., Goerges S., Sorn P., Loewer M., Sahin U., Castle J.C.
TCLP: an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression.
Genome Med. 7:118.1-118.7(2015)

Cross-references
Cell line collections (Providers) Coriell; GM23245
Cell line databases/resources cancercelllines; CVCL_0104
Anatomy/cell type resources BTO; BTO:0004765
Chemistry resources PharmacoDB; UKE1_1641_2019
Encyclopedic resources Wikidata; Q54990275
Experimental variables resources EFO; EFO_0006307
Gene expression databases ArrayExpress; E-MTAB-2706
GEO; GSM1374976
Polymorphism and mutation databases Cosmic; 1012055
Cosmic; 1281361
Cosmic; 1519161
Cosmic; 1633514
Cosmic; 2306996
Sequence databases EGA; EGAS00001000610
EGA; EGAS00001002554
Entry history
Entry creation04-Apr-2012
Last entry update05-Oct-2023
Version number25