org.expasy.bprg
Class PhenyxSILACPeptide
java.lang.Object
org.expasy.bprg.PhenyxSILACPeptide
public class PhenyxSILACPeptide
- extends java.lang.Object
- Author:
- chernand
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
PhenyxSILACPeptide
public PhenyxSILACPeptide(jxl.Cell[] identRowData)
isLabeledWith
public boolean isLabeledWith(java.lang.String label)
isLabeledWith
public boolean[] isLabeledWith(java.lang.String[] labels)
getAACount
public int getAACount(char[] labels)
getAACounts
public int[] getAACounts(char[] labels)
getAAPresent
public int getAAPresent(char[] labels)
getSpectrumId
public java.lang.String getSpectrumId()
getSpectrumLabel
public java.lang.String getSpectrumLabel()
getModifsExcept
public java.lang.Iterable<java.lang.String> getModifsExcept(java.lang.String exceptedLabel)
- Parameters:
modifsCell
-
- Returns:
getModifsExcept
public java.lang.Iterable<java.lang.String> getModifsExcept(java.lang.String[] exceptedLabels)
- Parameters:
modifsCell
-
- Returns:
getDescription
public java.lang.String getDescription()
- Returns:
- the description
getPeptideMass
public double getPeptideMass()
- Returns:
- the peptideMass
getPeptideString
public java.lang.String getPeptideString()
- Returns:
- the peptideString
getProteinName
public java.lang.String getProteinName()
- Returns:
- the proteinName