org.expasy.bprg
Class PeptideQuantiInfos
java.lang.Object
org.expasy.bprg.PeptideQuantiInfos
public class PeptideQuantiInfos
- extends java.lang.Object
- Author:
- chernand
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
PeptideQuantiInfos
public PeptideQuantiInfos()
collectInfos
public void collectInfos(PhenyxSILACPeptide phenyxPeptide,
SilacQuantiParam params)
getSumLightForms
public double getSumLightForms()
- Return only C12 value (was also adding c12-1Da and c12-2Da)
getSumHeavyForms
public double getSumHeavyForms()
getMasses
public java.lang.String getMasses()
- Returns:
- the masses
getForm
public java.lang.String getForm()
- Returns:
- the form
getLabeledAANumber
public int getLabeledAANumber()
- Returns:
- the labeledAANumber
getPeptideString
public java.lang.String getPeptideString()
- Returns:
- the peptideString
getProteinName
public java.lang.String getProteinName()
- Returns:
- the proteinName
getC12Areas
public double getC12Areas()
- Returns:
- the c12Areas
getC13Areas
public double[] getC13Areas()
- Returns:
- the c13Areas
getHeavyMass
public double getHeavyMass()
- Returns:
- the heavyMass
getIntermAreas
public double[][] getIntermAreas()
- Returns:
- the intermAreas
getIntermMasses
public double[] getIntermMasses()
- Returns:
- the intermMasses
getLightMass
public double getLightMass()
- Returns:
- the lightMass
isFileFound
public boolean isFileFound()
- Returns:
- the fileFound