UniProtKB/Swiss-Prot P69905: Variant p.Gly58Arg

Hemoglobin subunit alpha
Gene: HBA2
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Variant information Variant position:

58 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant:

LB/B The variants are classified into three categories: LP/P, LB/B and US.

LP/P: likely pathogenic or pathogenic.
LB/B: likely benign or benign.
US: uncertain significance

Residue change:

From Glycine (G) to Arginine (R) at position 58 (G58R, p.Gly58Arg). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties:

Change from glycine (G) to large size and basic (R) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score:

-2 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:

Lowest score: -4 (low probability of substitution).
Highest score: 11 (high probability of substitution).

More information can be found on the following page
Variant description:

In L-Persian Gulf. Any additional useful information about the variant.
Other resources:

Links to websites of interest for the variant.

Variant rs281864843 [ dbSNP | Ensembl ]

Sequence information Variant position:

58 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length:

142 The length of the canonical sequence.
Location on the sequence:

PTTKTYFPHFDLSHGSAQVK G HGKKVADALTNAVAHVDDMP The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation:

The multiple alignment of the region surrounding the variant against various orthologous sequences.

Human                         PTTKTYFPHF-DLSHGSAQVKGHGKKVADALTNAVAHVDDMP

Gorilla                       PTTKTYFPHF-DLSHGSAQVKGHGKKVADALTNAVAHVDDM

                              PTTKTYFPHF-DLSPGSAQVKAHGKKVADALTTAVAHLDDL

Rhesus macaque                PTTKTYFPHF-DLSHGSAQVKGHGKKVADALTLAVGHVDDM

Chimpanzee                    PTTKTYFPHF-DLSHGSAQVKGHGKKVADALTNAVAHVDDM

Mouse                         PTTKTYFPHF-DVSHGSAQVKGHGKKVADALASAAGHLDDL

Rat                           PTTKTYFSHI-DVSPGSAQVKAHGKKVADALAKAADHVEDL

Pig                           PTTKTYFPHF-NLSHGSDQVKAHGQKVADALTKAVGHLDDL

Bovine                        PTTKTYFPHF-DLSHGSAQVKGHGAKVAAALTKAVEHLDDL

Rabbit                        PTTKTYFPHF-DFTHGSEQIKAHGKKVSEALTKAVGHLDDL

Sheep                         PTTKTYFPHF-DLSHGSAQVKGHGEKVAAALTKAVGHLDDL

Cat                           PTTKTYFPHF-DLSHGSAQVKAHGQKVADALTQAVAHMDDL

Horse                         PTTKTYFPHF-DLSHGSAQVKAHGKKVGDALTLAVGHLDDL

Chicken                       PPTKTYFPHF-DLSHGSAQIKGHGKKVVAALIEAANHIDDI

Xenopus tropicalis            PKTKTYFPDF-DFSEHSKHILAHGKKVSDALNEACNHLDNI

Zebrafish                     PQTKTYFSHWADLSPGSGPVKKHGKTIMGAVGEAISKIDDL

Sequence annotation in neighborhood:

The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:

Type: the type of sequence feature.
Positions: endpoints of the sequence feature.
Description: contains additional information about the feature.

Type	Positions	Description
Chain	2 – 142	Hemoglobin subunit alpha
Domain	2 – 142	Globin
Binding site	59 – 59
Site	57 – 57	Not glycated
Site	61 – 61	Not glycated
Modified residue	41 – 41	N6-succinyllysine; alternate
Modified residue	50 – 50	Phosphoserine
Glycosylation	41 – 41	N-linked (Glc) (glycation) lysine; alternate
Glycosylation	62 – 62	N-linked (Glc) (glycation) lysine
Helix	54 – 72

Literature citations
No reference for the current variant in UniProtKB/Swiss-Prot.

Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.