UniProtKB/Swiss-Prot O95394: Variant p.Asp466Asn

Phosphoacetylglucosamine mutase
Gene: PGM3
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Variant information Variant position:

466 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant:

LB/B The variants are classified into three categories: LP/P, LB/B and US.

LP/P: likely pathogenic or pathogenic.
LB/B: likely benign or benign.
US: uncertain significance

Residue change:

From Aspartate (D) to Asparagine (N) at position 466 (D466N, p.Asp466Asn). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties:

Change from medium size and acidic (D) to medium size and polar (N) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score:

1 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:

Lowest score: -4 (low probability of substitution).
Highest score: 11 (high probability of substitution).

More information can be found on the following page
Variant description:

In allele PGM3*2. Any additional useful information about the variant.
Other resources:

Links to websites of interest for the variant.

Variant rs473267 [ dbSNP | Ensembl ]

Sequence information Variant position:

466 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length:

542 The length of the canonical sequence.
Location on the sequence:

DLPNRQLKVQVADRRVISTT D AERQAVTPPGLQEAINDLVK The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation:

The multiple alignment of the region surrounding the variant against various orthologous sequences.

Human                         DLPNRQLKVQVADRRVISTTDAERQAVTPPGLQEAINDLVK

Mouse                         DLPNRQLKVKVADRRVISTTDAERQAVTPPGLQEAINDLVK

Pig                           DLPNRQLKVKVADRQVISTTDAERQVVKPPGLQEAINDLVK

Baker's yeast                 DLPNKLVKCIVPDRSIFQTTDQERKLLNPVGLQDKIDLVVA

Fission yeast                 DLPNKLAKVKVSDRTIYKSTDAERRLVSPDGLQEKIDALVA

Sequence annotation in neighborhood:

The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:

Type: the type of sequence feature.
Positions: endpoints of the sequence feature.
Description: contains additional information about the feature.

Type	Positions	Description
Chain	1 – 542	Phosphoacetylglucosamine mutase

Literature citations
Functional cloning and mutational analysis of the human cDNA for phosphoacetylglucosamine mutase: identification of the amino acid residues essential for the catalysis.
Mio T.; Yamada-Okabe T.; Arisawa M.; Yamada-Okabe H.;
Biochim. Biophys. Acta 1492:369-376(2000)
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1); MUTAGENESIS; ACTIVE SITE; VARIANT ASN-466; The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
The MGC Project Team;
Genome Res. 14:2121-2127(2004)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1); VARIANT ASN-466; Identification of human phosphoglucomutase 3 (PGM3) as N-acetylglucosamine-phosphate mutase (AGM1).
Pang H.; Koda Y.; Soejima M.; Kimura H.;
Ann. Hum. Genet. 66:139-144(2002)
Cited for: VARIANT ASN-466;

Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.