UniProtKB/Swiss-Prot P01308: Variant p.Gly47Val

Insulin
Gene: INS
Chromosomal location: 11p15.5
Variant information

Variant position:  47
The position of the amino-acid change on the UniProtKB canonical protein sequence.

Type of variant:  Disease [Disclaimer]
The variants are classified into three categories: Disease, Polymorphism and Unclassified.
  • Disease: Variants have been found in patients and disease-association is reported in literature. However, this classification is not a definitive assessment of variant pathogenicity.
  • Polymorphism: No disease-association has been reported.
  • Unclassified: Variants have been found in patients but disease-association remains unclear.

Residue change:  From Glycine (G) to Valine (V) at position 47 (G47V, p.Gly47Val).
Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.

Physico-chemical properties:  Change from glycine (G) to medium size and hydrophobic (V)
The physico-chemical property of the reference and variant residues and the change implicated.

BLOSUM score:  -3
The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page

Variant description:  In PNDM.
Any additional useful information about the variant.

Other resources:  
Links to websites of interest for the variant.



Sequence information

Variant position:  47
The position of the amino-acid change on the UniProtKB canonical protein sequence.

Protein sequence length:  110
The length of the canonical sequence.

Location on the sequence:   NQHLCGSHLVEALYLVCGER  G FFYTPKTRREAEDLQVGQVE
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.

Residue conservation: 
The multiple alignment of the region surrounding the variant against various orthologous sequences.

Human                         NQHLCGSHLVEALYLVCGERGFFYTPKTRREAEDLQVG--QVE

Gorilla                       NQHLCGSHLVEALYLVCGERGFFYTPKTRREAEDLQVG--Q

Chimpanzee                    NQHLCGSHLVEALYLVCGERGFFYTPKTRREAEDLQVG--Q

Pig                           NQHLCGSHLVEALYLVCGERGFFYTPKARREAENPQAG--A

Bovine                        NQHLCGSHLVEALYLVCGERGFFYTPKARREVEGPQVG--A

Rabbit                        NQHLCGSHLVEALYLVCGERGFFYTPKSRREVEELQVG--Q

Goat                          NQHLCGSHLVEALYLVCGERGFFYTPKA-------------

Sheep                         NQHLCGSHLVEALYLVCGERGFFYTPKARREVEGPQVG--A

Cat                           NQHLCGSHLVEALYLVCGERGFFYTPKARREAEDLQGK--D

Dog                           NQHLCGSHLVEALYLVCGERGFFYTPKARREVEDLQVR--D

Horse                         NQHLCGSHLVEALYLVCGERGFFYTPKAXXEAEDPQVG--E

Chicken                       NQHLCGSHLVEALYLVCGERGFFYSPKARRDVEQPLVS--S

Zebrafish                     PQHLCGSHLVDALYLVCGPTGFFYNPK--RDVE-PLLGFLP

Sequence annotation in neighborhood:  
The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.

TypePositionsDescription
Peptide 25 – 54 Insulin B chain
Disulfide bond 31 – 96 Interchain (between B and A chains)
Disulfide bond 43 – 109 Interchain (between B and A chains)


Literature citations

Insulin gene mutations as a cause of permanent neonatal diabetes.
Stoy J.; Edghill E.L.; Flanagan S.E.; Ye H.; Paz V.P.; Pluzhnikov A.; Below J.E.; Hayes M.G.; Cox N.J.; Lipkind G.M.; Lipton R.B.; Greeley S.A.; Patch A.M.; Ellard S.; Steiner D.F.; Hattersley A.T.; Philipson L.H.; Bell G.I.;
Proc. Natl. Acad. Sci. U.S.A. 104:15040-15044(2007)
Cited for: VARIANTS PNDM ASP-24; ARG-32; SER-32; GLY-43; VAL-47; CYS-48; CYS-89; CYS-90; TYR-96 AND CYS-108;

Insulin mutation screening in 1,044 patients with diabetes: mutations in the INS gene are a common cause of neonatal diabetes but a rare cause of diabetes diagnosed in childhood or adulthood.
Edghill E.L.; Flanagan S.E.; Patch A.M.; Boustred C.; Parrish A.; Shields B.; Shepherd M.H.; Hussain K.; Kapoor R.R.; Malecki M.; MacDonald M.J.; Stoy J.; Steiner D.F.; Philipson L.H.; Bell G.I.; Hattersley A.T.; Ellard S.;
Diabetes 57:1034-1042(2008)
Cited for: VARIANTS PNDM ASP-24; ASP-29; ARG-32; SER-32; PRO-35; GLY-43; VAL-47; CYS-48; ARG-84; CYS-89; CYS-90; SER-96; TYR-96; CYS-101; CYS-103 AND CYS-108; VARIANT MODY10 CYS-6; VARIANT MET-68;

Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.