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UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot Q9UM73: Variant p.Phe1174Val

ALK tyrosine kinase receptor
Gene: ALK
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Variant information Variant position: help 1174 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: help LP/P [Disclaimer] The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance

Residue change: help From Phenylalanine (F) to Valine (V) at position 1174 (F1174V, p.Phe1174Val). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: help Change from large size and aromatic (F) to medium size and hydrophobic (V) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: help -1 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page

Variant description: help In NBLST3; somatic mutation; constitutively activated; retained in the endoplasmic reticulum and Golgi compartments. Any additional useful information about the variant.
Other resources: help Links to websites of interest for the variant.


Sequence information Variant position: help 1174 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: help 1620 The length of the canonical sequence.
Location on the sequence: help EVCSEQDELDFLMEALIISK F NHQNIVRCIGVSLQSLPRFI The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: help The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human                         EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI

Mouse                         EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQALPRFI

Zebrafish                     EVCSEQDELDFLMEALIISKFSHQNIVRCIGVSLQALPHFI

Sequence annotation in neighborhood: help The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.
TypePositionsDescription
Chain 19 – 1620 ALK tyrosine kinase receptor
Topological domain 1060 – 1620 Cytoplasmic
Domain 1116 – 1392 Protein kinase



Literature citations
Somatic and germline activating mutations of the ALK kinase receptor in neuroblastoma.
Janoueix-Lerosey I.; Lequin D.; Brugieres L.; Ribeiro A.; de Pontual L.; Combaret V.; Raynal V.; Puisieux A.; Schleiermacher G.; Pierron G.; Valteau-Couanet D.; Frebourg T.; Michon J.; Lyonnet S.; Amiel J.; Delattre O.;
Nature 455:967-970(2008)
Cited for: VARIANTS NBLST3 VAL-1174; LEU-1174; CYS-1174; PRO-1192; GLN-1275 AND SER-1278; VARIANT LEU-1275; The constitutive activity of the ALK mutated at positions F1174 or R1275 impairs receptor trafficking.
Mazot P.; Cazes A.; Boutterin M.C.; Figueiredo A.; Raynal V.; Combaret V.; Hallberg B.; Palmer R.H.; Delattre O.; Janoueix-Lerosey I.; Vigny M.;
Oncogene 30:2017-2025(2011)
Cited for: CHARACTERIZATION OF VARIANTS NBLST3 LEU-1174; VAL-1174 AND GLN-1275;
Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.