Variant position: 8 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 325 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human MPITRMR MRPWLEMQINSNQIPGLIWIN
Mouse MPITRMR MRPWLEMQINSNQIPGLIWIN
Rat MPITRMR MRPWLEMQINSNQIPGLSWIN
Pig MPITRMR MRPWLEMQINSNQIPGLIWIN
Bovine MPITRMR MRPWLEMQINSNQIPGLIWIN
Chicken MPVSRMR MRPWLEMQINSNQIPGLIWIN
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 325 Interferon regulatory factor 1
5 – 113 IRF tryptophan pentad repeat
Functionally inactivating point mutation in the tumor-suppressor IRF-1 gene identified in human gastric cancer.
Nozawa H.; Oda E.; Ueda S.; Tamura G.; Maesawa C.; Muto T.; Taniguchi T.; Tanaka N.;
Int. J. Cancer 77:522-527(1998)
Cited for: VARIANT GASC LEU-8; CHARACTERIZATION OF VARIANT GASC LEU-8;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.