UniProtKB/Swiss-Prot Q9UBX5: Variant p.Leu301Met

Fibulin-5
Gene: FBLN5
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Variant information Variant position:

301 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant:

US The variants are classified into three categories: LP/P, LB/B and US.

LP/P: likely pathogenic or pathogenic.
LB/B: likely benign or benign.
US: uncertain significance

Residue change:

From Leucine (L) to Methionine (M) at position 301 (L301M, p.Leu301Met). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties:

Similar physico-chemical property. Both residues are medium size and hydrophobic. The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score:

2 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:

Lowest score: -4 (low probability of substitution).
Highest score: 11 (high probability of substitution).

More information can be found on the following page
Variant description:

Found in a patient with autosomal recessive cutis laxa also carrying a mutation in ELN; uncertain significance. Any additional useful information about the variant.
Other resources:

Links to websites of interest for the variant.

Variant rs377360782 [ dbSNP | Ensembl ]

Sequence information Variant position:

301 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length:

448 The length of the canonical sequence.
Location on the sequence:

DDNRSCQDINECEHRNHTCN L QQTCYNLQGGFKCIDPIRCE The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation:

The multiple alignment of the region surrounding the variant against various orthologous sequences.

Human                         DDNRSCQDINECEHRNHTCNLQQTCYNLQGGFKCIDPIRCE

Mouse                         DDNRSCQDINECEHRNHTCTSLQTCYNLQGGFKCIDPISCE

Rat                           EDNRSCQDINECEHRNHTCTPLQTCYNLQGGFKCIDPIVCE

Bovine                        DDNRSCQDINECEHRNHTCILQQTCYNLQGGFKCIDPIRCE

Sequence annotation in neighborhood:

The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:

Type: the type of sequence feature.
Positions: endpoints of the sequence feature.
Description: contains additional information about the feature.

Type	Positions	Description
Chain	24 – 448	Fibulin-5
Domain	288 – 333	EGF-like 6; calcium-binding
Region	245 – 448	Interaction with LOXL1
Glycosylation	283 – 283	N-linked (GlcNAc...) asparagine
Glycosylation	296 – 296	N-linked (GlcNAc...) asparagine
Disulfide bond	292 – 305
Disulfide bond	299 – 314

Literature citations
An autosomal-recessive form of cutis laxa is due to homozygous elastin mutations, and the phenotype may be modified by a heterozygous fibulin 5 polymorphism.
Megarbane H.; Florence J.; Sass J.O.; Schwonbeck S.; Foglio M.; de Cid R.; Cure S.; Saker S.; Megarbane A.; Fischer J.;
J. Invest. Dermatol. 129:1650-1655(2009)
Cited for: VARIANT MET-301;

Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.