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UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot Q8NBS3: Variant p.Thr418Ile

Solute carrier family 4 member 11
Gene: SLC4A11
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Variant information Variant position: help 418 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: help LP/P [Disclaimer] The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance

Residue change: help From Threonine (T) to Isoleucine (I) at position 418 (T418I, p.Thr418Ile). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: help Change from medium size and polar (T) to medium size and hydrophobic (I) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: help -1 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page

Variant description: help In FECD4; decreases cell surface expression; highly reduces functional activity. Any additional useful information about the variant.


Sequence information Variant position: help 418 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: help 875 The length of the canonical sequence.
Location on the sequence: help QSIGGLLYALFSGQPLVILL T TAPLALYIQVIRVICDDYDL The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: help The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human                         QSIGGLLYALFSGQPLVILLTTAPLALYIQVIRVICDDYDL

Mouse                         QSIGGLLYALFSGQPLVILLTTAPLAIYTQVIRVICDDYNL

Sequence annotation in neighborhood: help The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.
TypePositionsDescription
Chain 1 – 875 Solute carrier family 4 member 11
Transmembrane 414 – 430 Helical
Alternative sequence 1 – 466 Missing. In isoform 2.



Literature citations
Biosynthetic and functional defects in newly identified SLC4A11 mutants and absence of COL8A2 mutations in Fuchs endothelial corneal dystrophy.
Soumittra N.; Loganathan S.K.; Madhavan D.; Ramprasad V.L.; Arokiasamy T.; Sumathi S.; Karthiyayini T.; Rachapalli S.R.; Kumaramanickavel G.; Casey J.R.; Rajagopal R.;
J. Hum. Genet. 59:444-453(2014)
Cited for: VARIANTS FECD4 SER-224; LYS-383; ILE-418 AND ILE-491; CHARACTERIZATION OF VARIANTS FECD4 SER-224; ILE-418 AND ILE-491; FUNCTION; SUBCELLULAR LOCATION;
Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.