Cell line name | KATO III | ||||||||||||||||||||||||||||||||
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Synonyms | Kato III; Kato-III; KATO-III; KATOIII; KatoIII; KATO 3; JTC-28; Japanese Tissue Culture-28 | ||||||||||||||||||||||||||||||||
Accession | CVCL_0371 | ||||||||||||||||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: KATO III (RRID:CVCL_0371) | ||||||||||||||||||||||||||||||||
Comments | Part of: Cancer Cell Line Encyclopedia (CCLE) project. Part of: COSMIC cell lines project. Part of: FGFR genetic alteration cell panel (ATCC TCP-1034). Part of: MD Anderson Cell Lines Project. Population: Japanese. Doubling time: 36 hours (PubMed=209229); 32-34 hours (PubMed=3962675); 37-41 hours (CelloPub=CLPUB00584). Microsatellite instability: Stable (MSS) (Sanger). Omics: ChIP-seq GATA4 analysis. Omics: ChIP-seq GATA6 analysis. Omics: ChIP-seq KLF5 analysis. Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: Deep RNAseq analysis. Omics: DNA methylation analysis. Omics: Protein expression by reverse-phase protein arrays. Omics: SNP array analysis. Omics: Transcriptome analysis. | ||||||||||||||||||||||||||||||||
Sequence variations | Gene deletion; TP53; Zygosity=Homozygous (PubMed=1370612; PubMed=1933850). | ||||||||||||||||||||||||||||||||
HLA typing | Source: PubMed=9023415
Source: PubMed=25960936
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Genome ancestry | Source: PubMed=30894373
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Disease | Down syndrome (NCIt: C2993) Gastric signet ring cell adenocarcinoma (NCIt: C5250) Down syndrome (ORDO: Orphanet_870) Derived from metastatic site: Pleural effusion. | ||||||||||||||||||||||||||||||||
Species of origin | Homo sapiens (Human)
(NCBI Taxonomy: 9606)
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Hierarchy | Parent: CVCL_M882 (KATO II) Children:
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Sex of cell | Male | ||||||||||||||||||||||||||||||||
Age at sampling | 57Y | ||||||||||||||||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||||||||||||||||
STR profile | Source(s): AddexBio; ATCC; CLS; ECACC; JCRB; KCLB; PubMed=25877200; RCB; TKG Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||||||||||||||||
Web pages | http://tcpaportal.org/mclp/ http://www.cellresource.cn/fdetail.aspx?id=1595 | ||||||||||||||||||||||||||||||||
Publications | CLPUB00581 PubMed=209229 CLPUB00584 PubMed=6862145; DOI=10.20772/cancersci1959.74.2_240 PubMed=3518877; DOI=10.3109/07357908609038260 PubMed=3962675; DOI=10.1111/j.1440-1827.1986.tb01461.x DOI=10.2198/sbk.34.289 PubMed=1778766; DOI=10.1111/j.1349-7006.1991.tb01816.x PubMed=1933850 PubMed=1370612; DOI=10.1016/S0006-291X(05)80133-0 DOI=10.1016/B978-0-12-333530-2.50014-9 PubMed=9023415; DOI=10.1006/cimm.1996.1062 PubMed=9247707; DOI=10.1080/15216549700202901 PubMed=9290701; DOI=10.1002/(SICI)1098-2744(199708)19:4<243::AID-MC5>3.0.CO;2-D PubMed=11107048; DOI=10.1046/j.1440-1827.2000.01117.x PubMed=11314020; DOI=10.1038/sj.onc.1204160 PubMed=15723654; DOI=10.1111/j.1349-7006.2005.00016.x PubMed=17505008; DOI=10.1158/1078-0432.CCR-06-2743 PubMed=20164919; DOI=10.1038/nature08768 PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458 PubMed=22460905; DOI=10.1038/nature11003 PubMed=24807215; DOI=10.1038/ncomms4830 PubMed=25960936; DOI=10.4161/21624011.2014.954893 PubMed=25485619; DOI=10.1038/nbt.3080 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017 PubMed=28196595; DOI=10.1016/j.ccell.2017.01.005 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747 PubMed=31068700; DOI=10.1038/s41586-019-1186-3 PubMed=31978347; DOI=10.1016/j.cell.2019.12.023 | ||||||||||||||||||||||||||||||||
Cross-references | |||||||||||||||||||||||||||||||||
Cell line collections | AddexBio; C0023001/53
ATCC; HTB-103 BCRC; 60200 BCRJ; 0318 CCTCC; GDC0253 CLS; 300381/p610_KATO-III ECACC; 86093004 IZSLER; BS TCL 151 JCRB; JCRB0611 JCRB; NIHS0052 - Discontinued KCB; KCB 2014045YJ KCLB; 30103 NCBI_Iran; C640 RCB; RCB2088 TKG; TKG 0213 | ||||||||||||||||||||||||||||||||
Cell line databases/resources | CLDB; cl5214
CLDB; cl3000 CCLE; KATOIII_STOMACH CCRID; 3131C0001001200014 Cell_Model_Passport; SIDM00687 CGH-DB; 122-1 CGH-DB; 9024-4 Cosmic-CLP; 907276 DepMap; ACH-000793 IGRhCellID; KATOIII LINCS_HMS; 50022 LINCS_LDP; LCL-2003 | ||||||||||||||||||||||||||||||||
Ontologies | BTO; BTO:0001092
CLO; CLO_0007073 CLO; CLO_0050790 EFO; EFO_0002217 MCCL; MCC:0000266 | ||||||||||||||||||||||||||||||||
Biological sample resources | BioSample; SAMN01821574
BioSample; SAMN01821690 BioSample; SAMN03471089 BioSample; SAMN03473264 BioSample; SAMN10988331 | ||||||||||||||||||||||||||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL3308432
ChEMBL-Targets; CHEMBL612700 GDSC; 907276 PharmacoDB; KATOIII_737_2019 | ||||||||||||||||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-38
ArrayExpress; E-MTAB-783 ArrayExpress; E-MTAB-2706 ArrayExpress; E-MTAB-2770 ArrayExpress; E-MTAB-3610 GEO; GSM267419 GEO; GSM267426 GEO; GSM267433 GEO; GSM267440 GEO; GSM552362 GEO; GSM562404 GEO; GSM827547 GEO; GSM828835 GEO; GSM844573 GEO; GSM887200 GEO; GSM888273 GEO; GSM1237676 GEO; GSM1237701 GEO; GSM1250898 GEO; GSM1250899 GEO; GSM1250900 GEO; GSM1250901 GEO; GSM1374593 GEO; GSM1374594 GEO; GSM1669980 | ||||||||||||||||||||||||||||||||
Other | Wikidata; Q54899539 | ||||||||||||||||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 685595
Cosmic; 687555 Cosmic; 755614 Cosmic; 801336 Cosmic; 848150 Cosmic; 848375 Cosmic; 877044 Cosmic; 887248 Cosmic; 888823 Cosmic; 889107 Cosmic; 907276 Cosmic; 922690 Cosmic; 926118 Cosmic; 968350 Cosmic; 1001657 Cosmic; 1067210 Cosmic; 1090464 Cosmic; 1093302 Cosmic; 1187279 Cosmic; 1223583 Cosmic; 1518254 Cosmic; 1571766 Cosmic; 1627262 Cosmic; 1890472 Cosmic; 2009529 Cosmic; 2036664 Cosmic; 2069771 Cosmic; 2484964 Cosmic; 2807629 Cosmic; 2823224 IARC_TP53; 21648 LiGeA; CCLE_710 Progenetix; CVCL_0371 | ||||||||||||||||||||||||||||||||
Entry history | |||||||||||||||||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||||||||||||||||
Last entry update | 12-Jan-2021 | ||||||||||||||||||||||||||||||||
Version number | 36 |