Cellosaurus M059J (CVCL_0400)

Cell line name M059J
Synonyms Mo 59J; MO59J
Accession CVCL_0400
Resource Identification Initiative To cite this cell line use: M059J (RRID:CVCL_0400)
Comments Part of: ENCODE project common cell types; tier 3.
Microsatellite instability: Stable (MSS) (Sanger).
Omics: Deep exome analysis.
Omics: Deep RNAseq analysis.
Omics: DNA methylation analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis.
Disease Glioblastoma (NCIt: C3058)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_0401 ! M059K
Sex of cell Male
Category Cancer cell line
STR profile Source(s): ATCC; Cosmic-CLP; PubMed=25877200

Markers:
AmelogeninX,Y (ATCC; Cosmic-CLP)
X (PubMed=25877200)
CSF1PO10,12 (ATCC; Cosmic-CLP)
10 (PubMed=25877200)
D13S31714
D16S53910,12
D18S5115,19
D21S1130,31.2
D3S135814
D5S81811,12 (ATCC; Cosmic-CLP)
12 (PubMed=25877200)
D7S82010,12 (ATCC; Cosmic-CLP)
10 (PubMed=25877200)
D8S117915
FGA20
Penta D12,13
Penta E7
TH019.3
TPOX8
vWA17
Web pages http://genome.ucsc.edu/ENCODE/protocols/cell/human/M059J_Stam_protocol.pdf
Publications

PubMed=8316628; DOI=10.2307/3578196
Allalunis-Turner M.J., Barron G.M., Day R.S. III, Dobler K.D., Mirzayans R.
Isolation of two cell lines from a human malignant glioma specimen differing in sensitivity to radiation and chemotherapeutic drugs.
Radiat. Res. 134:349-354(1993)

PubMed=25485619; DOI=10.1038/nbt.3080
Klijn C., Durinck S., Stawiski E.W., Haverty P.M., Jiang Z., Liu H., Degenhardt J., Mayba O., Gnad F., Liu J., Pau G., Reeder J., Cao Y., Mukhyala K., Selvaraj S.K., Yu M., Zynda G.J., Brauer M.J., Wu T.D., Gentleman R.C., Manning G., Yauch R.L., Bourgon R., Stokoe D., Modrusan Z., Neve R.M., de Sauvage F.J., Settleman J., Seshagiri S., Zhang Z.
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

PubMed=27397505; DOI=10.1016/j.cell.2016.06.017
Iorio F., Knijnenburg T.A., Vis D.J., Bignell G.R., Menden M.P., Schubert M., Aben N., Goncalves E., Barthorpe S., Lightfoot H., Cokelaer T., Greninger P., van Dyk E., Chang H., de Silva H., Heyn H., Deng X., Egan R.K., Liu Q., Mironenko T., Mitropoulos X., Richardson L., Wang J., Zhang T., Moran S., Sayols S., Soleimani M., Tamborero D., Lopez-Bigas N., Ross-Macdonald P., Esteller M., Gray N.S., Haber D.A., Stratton M.R., Benes C.H., Wessels L.F.A., Saez-Rodriguez J., McDermott U., Garnett M.J.
A landscape of pharmacogenomic interactions in cancer.
Cell 166:740-754(2016)

Cross-references
Cell line collections ATCC; CRL-2366
BCRC; 60382
BCRJ; 0151
Cell line databases/resources Cosmic-CLP; 949094
GDSC; 949094
LINCS_LDP; LCL-1356
Ontologies CLO; CLO_0007445
EFO; EFO_0005697
MCCL; MCC:0000294
Biological sample resources BioSample; SAMN03471832
BioSample; SAMN03473044
ENCODE; ENCBS062ILC
ENCODE; ENCBS235AAA
ENCODE; ENCBS304XWS
ENCODE; ENCBS370AFW
Chemistry resources ChEMBL-Cells; CHEMBL3308113
ChEMBL-Targets; CHEMBL1075494
Gene expression databases GEO; GSM326251
GEO; GSM1374640
GEO; GSM1670070
Polymorphism and mutation databases Cosmic; 949094
Cosmic; 1746953
Cosmic; 2367537