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Cellosaurus Hs 888.T (CVCL_0979)

[Text version]

Cell line name Hs 888.T
Synonyms Hs888T; HS888T
Accession CVCL_0979
Resource Identification Initiative To cite this cell line use: Hs 888.T (RRID:CVCL_0979)
Comments Part of: Cancer Cell Line Encyclopedia (CCLE) project.
Part of: Naval Biosciences Laboratory (NBL) collection (transferred to ATCC in 1982).
Omics: Deep exome analysis.
Omics: Deep RNAseq analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis.
Genome ancestry Source: PubMed=30894373

Origin% genome
African2.45
Native American0.69
East Asian, North0.26
East Asian, South1.64
South Asian7.7
European, North29.88
European, South57.38
Disease Osteosarcoma (NCIt: C9145)
Osteosarcoma (ORDO: Orphanet_668)
Derived from metastatic site: Lung.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_0977 ! Hs 888.Lu
CVCL_0978 ! Hs 888.Sk
CVCL_0987 ! Hs 894(A).T
CVCL_0988 ! Hs 894(B).T
CVCL_0989 ! Hs 894(C).T
CVCL_0990 ! Hs 894(D).T
CVCL_0991 ! Hs 894(E).Lu
CVCL_0996 ! Hs 899(A).T
CVCL_0997 ! Hs 899(B).T
CVCL_0998 ! Hs 899(C).T
CVCL_0999 ! Hs 899(D).T
Sex of cell Male
Age at sampling 20Y
Category Cancer cell line
STR profile Source(s): ATCC

Markers:
AmelogeninX,Y
CSF1PO10,11
D5S81813
D7S8207,11
D13S31711,14
D16S5398,12
TH019.3,10
TPOX8,11
vWA15,18

Run an STR similarity search on this cell line
Publications

PubMed=22460905; DOI=10.1038/nature11003
Barretina J.G., Caponigro G., Stransky N., Venkatesan K., Margolin A.A., Kim S., Wilson C.J., Lehar J., Kryukov G.V., Sonkin D., Reddy A., Liu M., Murray L., Berger M.F., Monahan J.E., Morais P., Meltzer J., Korejwa A., Jane-Valbuena J., Mapa F.A., Thibault J., Bric-Furlong E., Raman P., Shipway A., Engels I.H., Cheng J., Yu G.-Y.K., Yu J.-J., Aspesi P. Jr., de Silva M., Jagtap K., Jones M.D., Wang L., Hatton C., Palescandolo E., Gupta S., Mahan S., Sougnez C., Onofrio R.C., Liefeld T., MacConaill L.E., Winckler W., Reich M., Li N.-X., Mesirov J.P., Gabriel S.B., Getz G., Ardlie K., Chan V., Myer V.E., Weber B.L., Porter J., Warmuth M., Finan P., Harris J.L., Meyerson M., Golub T.R., Morrissey M.P., Sellers W.R., Schlegel R., Garraway L.A.
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity.
Nature 483:603-607(2012)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747
Dutil J., Chen Z.-H., Monteiro A.N.A., Teer J.K., Eschrich S.A.
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

PubMed=31068700; DOI=10.1038/s41586-019-1186-3
Ghandi M., Huang F.W., Jane-Valbuena J., Kryukov G.V., Lo C.C., McDonald E.R. III, Barretina J., Gelfand E.T., Bielski C.M., Li H., Hu K., Andreev-Drakhlin A.Y., Kim J., Hess J.M., Haas B.J., Aguet F., Weir B.A., Rothberg M.V., Paolella B.R., Lawrence M.S., Akbani R., Lu Y., Tiv H.L., Gokhale P.C., de Weck A., Mansour A.A., Oh C., Shih J., Hadi K., Rosen Y., Bistline J., Venkatesan K., Reddy A., Sonkin D., Liu M., Lehar J., Korn J.M., Porter D.A., Jones M.D., Golji J., Caponigro G., Taylor J.E., Dunning C.M., Creech A.L., Warren A.C., McFarland J.M., Zamanighomi M., Kauffmann A., Stransky N., Imielinski M., Maruvka Y.E., Cherniack A.D., Tsherniak A., Vazquez F., Jaffe J.D., Lane A.A., Weinstock D.M., Johannessen C.M., Morrissey M.P., Stegmeier F., Schlegel R., Hahn W.C., Getz G., Mills G.B., Boehm J.S., Golub T.R., Garraway L.A., Sellers W.R.
Next-generation characterization of the Cancer Cell Line Encyclopedia.
Nature 569:503-508(2019)

Cross-references
Cell line collections ATCC; CRL-7622
Cell line databases/resources CCLE; HS888T_FIBROBLAST
DepMap; ACH-000154
Ontologies CLO; CLO_0004186
Biological sample resources BioSample; SAMN10988554
Chemistry resources PharmacoDB; Hs888_T_606_2019
Gene expression databases ArrayExpress; E-MTAB-2770
GEO; GSM887126
GEO; GSM888197
Other Wikidata; Q54896167
Polymorphism and mutation databases IARC_TP53; 30071
LiGeA; CCLE_713
Progenetix; CVCL_0979
Entry history
Entry creation04-Apr-2012
Last entry update29-Oct-2020
Version number18