Home  |  Contact

Cellosaurus DJM-1 (CVCL_1172)

[Text version]

Cell line name DJM-1
Synonyms DJM1
Accession CVCL_1172
Resource Identification Initiative To cite this cell line use: DJM-1 (RRID:CVCL_1172)
Comments Part of: Cancer Cell Line Encyclopedia (CCLE) project.
Part of: COSMIC cell lines project.
Microsatellite instability: Stable (MSS) (Sanger).
Omics: Deep exome analysis.
Omics: DNA methylation analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis.
Sequence variations Heterozygous for TP53 p.Gly266Val (c.797G>T) (IARC_TP53 from Cosmic-CLP).
Genome ancestry Source: PubMed=30894373

Origin% genome
African0
Native American0
East Asian, North79.62
East Asian, South19.44
South Asian0.93
European, North0
European, South0
Disease Skin squamous cell carcinoma (NCIt: C4819)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_8157 (BSCC-93)
Sex of cell Female
Age at sampling 87Y
Category Cancer cell line
STR profile Source(s): Cosmic-CLP; RCB

Markers:
AmelogeninX
CSF1PO11,12
D5S81810,13
D7S8207,8
D13S3178
D16S53910
TH016
TPOX8,9
vWA14,17

Run an STR similarity search on this cell line
Publications

PubMed=20164919; DOI=10.1038/nature08768
Bignell G.R., Greenman C.D., Davies H., Butler A.P., Edkins S., Andrews J.M., Buck G., Chen L., Beare D., Latimer C., Widaa S., Hinton J., Fahey C., Fu B., Swamy S., Dalgliesh G.L., Teh B.T., Deloukas P., Yang F., Campbell P.J., Futreal P.A., Stratton M.R.
Signatures of mutation and selection in the cancer genome.
Nature 463:893-898(2010)

PubMed=27397505; DOI=10.1016/j.cell.2016.06.017
Iorio F., Knijnenburg T.A., Vis D.J., Bignell G.R., Menden M.P., Schubert M., Aben N., Goncalves E., Barthorpe S., Lightfoot H., Cokelaer T., Greninger P., van Dyk E., Chang H., de Silva H., Heyn H., Deng X., Egan R.K., Liu Q., Mironenko T., Mitropoulos X., Richardson L., Wang J., Zhang T., Moran S., Sayols S., Soleimani M., Tamborero D., Lopez-Bigas N., Ross-Macdonald P., Esteller M., Gray N.S., Haber D.A., Stratton M.R., Benes C.H., Wessels L.F.A., Saez-Rodriguez J., McDermott U., Garnett M.J.
A landscape of pharmacogenomic interactions in cancer.
Cell 166:740-754(2016)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747
Dutil J., Chen Z., Monteiro A.N., Teer J.K., Eschrich S.A.
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

Cross-references
Cell line collections BCRJ; 0375
RCB; RCB0736
Cell line databases/resources CCLE; DJM1_SKIN
Cell_Model_Passport; SIDM00281
Cosmic-CLP; 906841
GDSC; 906841
LINCS_LDP; LCL-1405
Ontologies CLO; CLO_0050680
Biological sample resources BioSample; SAMN03472223
Chemistry resources ChEMBL-Cells; CHEMBL3308190
ChEMBL-Targets; CHEMBL2366264
Gene expression databases ArrayExpress; E-MTAB-3610
GEO; GSM1669733
Other Wikidata; Q54831104
Polymorphism and mutation databases Cosmic; 906841
IARC_TP53; 21302
Entry history
Entry creation04-Apr-2012
Last entry updated24-May-2019
Version number21