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Cellosaurus ECC4 (CVCL_1190)

[Text version]
Cell line name ECC4
Synonyms ECC 4
Accession CVCL_1190
Resource Identification Initiative To cite this cell line use: ECC4 (RRID:CVCL_1190)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Population: Japanese.
Doubling time: 140 hours (PubMed=8392984).
Omics: DNA methylation analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis by microarray.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Rectum; UBERON=UBERON_0001052.
Disease Rectal adenocarcinoma (NCIt: C9383)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 45Y
Category Cancer cell line
STR profile Source(s): DepMap; RCB

Markers:
AmelogeninX
CSF1PO12
D3S135815
D5S81811
D7S82010,12
D8S11799,10
D13S31711
D16S53910
D18S5114
D21S1130
FGA20
Penta D9
Penta E10,12
TH017,9
TPOX8,11
vWA14

Run an STR similarity search on this cell line
Web pages http://fantom.gsc.riken.jp/5/sstar/FF:10609-108F6
Publications

PubMed=8392984; DOI=10.1002/ijc.2910540617
Fujiwara T., Motoyama T., Ishihara N., Watanabe H., Kumanishi T., Kato K., Ichinose H., Nagatsu T.
Characterization of four new cell lines derived from small-cell gastrointestinal carcinoma.
Int. J. Cancer 54:965-971(1993)

PubMed=20164919; DOI=10.1038/nature08768
Bignell G.R., Greenman C.D., Davies H., Butler A.P., Edkins S., Andrews J.M., Buck G., Chen L., Beare D., Latimer C., Widaa S., Hinton J., Fahey C., Fu B.-Y., Swamy S., Dalgliesh G.L., Teh B.T., Deloukas P., Yang F.-T., Campbell P.J., Futreal P.A., Stratton M.R.
Signatures of mutation and selection in the cancer genome.
Nature 463:893-898(2010)

Cross-references
Cell line collections (Providers) RCB; RCB0982
Cell line databases/resources CLO; CLO_0051398
cancercelllines; CVCL_1190
Cell_Model_Passport; SIDM00069
DepMap; ACH-002024
LINCS_LDP; LCL-1115
Biological sample resources BioSample; SAMN03472195
Chemistry resources ChEMBL-Cells; CHEMBL3308162
ChEMBL-Targets; CHEMBL2366367
GDSC; 906850
PharmacoDB; ECC4_319_2019
PubChem_Cell_line; CVCL_1190
Encyclopedic resources Wikidata; Q54831925
Gene expression databases ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-3610
GEO; GSM1669752
Polymorphism and mutation databases Cosmic; 906850
IARC_TP53; 21320
Sequence databases EGA; EGAS00001000978
Entry history
Entry creation04-Apr-2012
Last entry update05-Oct-2023
Version number26