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Cellosaurus ECC4 (CVCL_1190)

[Text version]

Cell line name ECC4
Synonyms ECC 4
Accession CVCL_1190
Resource Identification Initiative To cite this cell line use: ECC4 (RRID:CVCL_1190)
Comments Population: Japanese.
Doubling time: 140 hours (PubMed=8392984).
Omics: Deep RNAseq analysis.
Omics: DNA methylation analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis.
Derived from sampling site: Rectum.
Disease Rectal adenocarcinoma (NCIt: C9383)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 45Y
Category Cancer cell line
STR profile Source(s): DepMap; RCB

Markers:
AmelogeninX
CSF1PO12
D3S135815
D5S81811
D7S82010,12
D8S11799,10
D13S31711
D16S53910
D18S5114
D21S1130
FGA20
Penta D9
Penta E10,12
TH017,9
TPOX8,11
vWA14

Run an STR similarity search on this cell line
Web pages http://fantom.gsc.riken.jp/5/sstar/FF:10609-108F6
Publications

PubMed=8392984; DOI=10.1002/ijc.2910540617
Fujiwara T., Motoyama T., Ishihara N., Watanabe H., Kumanishi T., Kato K., Ichinose H., Nagatsu T.
Characterization of four new cell lines derived from small-cell gastrointestinal carcinoma.
Int. J. Cancer 54:965-971(1993)

PubMed=20164919; DOI=10.1038/nature08768
Bignell G.R., Greenman C.D., Davies H., Butler A.P., Edkins S., Andrews J.M., Buck G., Chen L., Beare D., Latimer C., Widaa S., Hinton J., Fahey C., Fu B., Swamy S., Dalgliesh G.L., Teh B.T., Deloukas P., Yang F., Campbell P.J., Futreal P.A., Stratton M.R.
Signatures of mutation and selection in the cancer genome.
Nature 463:893-898(2010)

Cross-references
Cell line collections RCB; RCB0982
Cell line databases/resources Cell_Model_Passport; SIDM00069
DepMap; ACH-002024
LINCS_LDP; LCL-1115
Ontologies CLO; CLO_0051398
Biological sample resources BioSample; SAMN03472195
Chemistry resources ChEMBL-Cells; CHEMBL3308162
ChEMBL-Targets; CHEMBL2366367
GDSC; 906850
PharmacoDB; ECC4_319_2019
Gene expression databases ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-3610
GEO; GSM1669752
Other Wikidata; Q54831925
Polymorphism and mutation databases Cosmic; 906850
IARC_TP53; 21320
Entry history
Entry creation04-Apr-2012
Last entry update29-Oct-2020
Version number21