Home  |  Contact

Cellosaurus NCI-H1688 (CVCL_1487)

[Text version]

Cell line name NCI-H1688
Synonyms H1688; H-1688; NCIH1688
Accession CVCL_1487
Resource Identification Initiative To cite this cell line use: NCI-H1688 (RRID:CVCL_1487)
Comments Part of: Cancer Cell Line Encyclopedia (CCLE) project.
Part of: COSMIC cell lines project.
Microsatellite instability: Stable (MSS) (Sanger).
Omics: Deep exome analysis.
Omics: DNA methylation analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis.
Genome ancestry Source: PubMed=30894373

Origin% genome
African0.98
Native American0
East Asian, North2.19
East Asian, South0
South Asian0
European, North61.82
European, South35
Disease Small cell lung carcinoma (NCIt: C4917)
Derived from metastatic site: Liver.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_E098 ! NCI-BL1688
Sex of cell Male
Age at sampling 50Y
Category Cancer cell line
STR profile Source(s): ATCC; Cosmic-CLP

Markers:
AmelogeninX
CSF1PO12
D5S81810
D7S82012
D13S3178
D16S53913
TH016,8
TPOX11
vWA17

Run an STR similarity search on this cell line
Web pages http://www.cellresource.cn/fdetail.aspx?id=720
Publications

PubMed=8806092; DOI=10.1002/jcb.240630505
Phelps R.M., Johnson B.E., Ihde D.C., Gazdar A.F., Carbone D.P., McClintock P.R., Linnoila R.I., Matthews M.J., Bunn P.A. Jr., Carney D.N., Minna J.D., Mulshine J.L.
NCI-Navy Medical Oncology Branch cell line data base.
J. Cell. Biochem. 63 Suppl. 24:32-91(1996)

PubMed=8806103; DOI=10.1002/jcb.240630516
Johnson B.E., Russell E., Simmons A.M., Phelps R.M., Steinberg S.M., Ihde D.C., Gazdar A.F.
MYC family DNA amplification in 126 tumor cell lines from patients with small cell lung cancer.
J. Cell. Biochem. 63 Suppl. 24:210-217(1996)

PubMed=10037197
Tang X.X., Brodeur G.M., Campling B.G., Ikegaki N.
Coexpression of transcripts encoding EPHB receptor protein tyrosine kinases and their ephrin-B ligands in human small cell lung carcinoma.
Clin. Cancer Res. 5:455-460(1999)

PubMed=27397505; DOI=10.1016/j.cell.2016.06.017
Iorio F., Knijnenburg T.A., Vis D.J., Bignell G.R., Menden M.P., Schubert M., Aben N., Goncalves E., Barthorpe S., Lightfoot H., Cokelaer T., Greninger P., van Dyk E., Chang H., de Silva H., Heyn H., Deng X., Egan R.K., Liu Q., Mironenko T., Mitropoulos X., Richardson L., Wang J., Zhang T., Moran S., Sayols S., Soleimani M., Tamborero D., Lopez-Bigas N., Ross-Macdonald P., Esteller M., Gray N.S., Haber D.A., Stratton M.R., Benes C.H., Wessels L.F.A., Saez-Rodriguez J., McDermott U., Garnett M.J.
A landscape of pharmacogenomic interactions in cancer.
Cell 166:740-754(2016)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747
Dutil J., Chen Z., Monteiro A.N., Teer J.K., Eschrich S.A.
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

Cross-references
Cell line collections ATCC; CCL-257
BCRC; 60497
KCLB; 91688
Cell line databases/resources CCLE; NCIH1688_LUNG
CCRID; 3131C0001000700154
Cell_Model_Passport; SIDM00792
Cosmic-CLP; 1298349
DepMap; ACH-002170
GDSC; 1298349
LINCS_LDP; LCL-1811
Ontologies BTO; BTO:0005966
CLO; CLO_0008011
Biological sample resources BioSample; SAMN03471387
Gene expression databases ArrayExpress; E-MTAB-3610
GEO; GSM784264
GEO; GSM986174
GEO; GSM1670184
Other Wikidata; Q54907846
Polymorphism and mutation databases Cosmic; 1995533
Entry history
Entry creation04-Apr-2012
Last entry updated05-Jul-2019
Version number25