Cell line name | RERF-LC-Sq1 | ||||||||||||||||||
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Synonyms | RERF-LC-Sq-1; RERFLCSQ1; RERFLCSq1; Radiation Effects Research Foundation-Lung Cancer-Squamous 1 | ||||||||||||||||||
Accession | CVCL_1656 | ||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: RERF-LC-Sq1 (RRID:CVCL_1656) | ||||||||||||||||||
Comments | Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Population: Japanese. Doubling time: 4-5 days (lot 09022008) (JCRB). Microsatellite instability: Stable (MSS) (Sanger). Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: Deep RNAseq analysis. Omics: DNA methylation analysis. Omics: SNP array analysis. Omics: Transcriptome analysis. Derived from sampling site: Lung. | ||||||||||||||||||
Sequence variations |
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Genome ancestry | Source: PubMed=30894373
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Disease | Lung squamous cell carcinoma (NCIt: C3493) | ||||||||||||||||||
Species of origin | Homo sapiens (Human)
(NCBI Taxonomy: 9606)
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Hierarchy | Children:
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Sex of cell | Female | ||||||||||||||||||
Age at sampling | 74Y | ||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||
STR profile | Source(s): Cosmic-CLP; JCRB Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||
Publications | PubMed=16105816; DOI=10.1158/0008-5472.CAN-05-0331 PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458 PubMed=22460905; DOI=10.1038/nature11003 PubMed=24002593; DOI=10.1038/bjc.2013.452 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747 PubMed=31068700; DOI=10.1038/s41586-019-1186-3 PubMed=31978347; DOI=10.1016/j.cell.2019.12.023 | ||||||||||||||||||
Cross-references | |||||||||||||||||||
Cell line collections | JCRB; JCRB1019
JCRB; NIHS0276 - Discontinued | ||||||||||||||||||
Cell line databases/resources | Cell_Model_Passport; SIDM00354
Cosmic-CLP; 1298538 DepMap; ACH-000442 LINCS_LDP; LCL-1592 | ||||||||||||||||||
Biological sample resources | BioSample; SAMN03472534
BioSample; SAMN10988238 | ||||||||||||||||||
Chemistry resources | GDSC; 1298538
PharmacoDB; RERFLCSq1_1308_2019 | ||||||||||||||||||
Encyclopedic resources | Wikidata; Q54949776 | ||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-2770
ArrayExpress; E-MTAB-3610 GEO; GSM827378 GEO; GSM887537 GEO; GSM888619 GEO; GSM1374848 GEO; GSM1670374 | ||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 946073
Cosmic; 1995620 LiGeA; CCLE_663 Progenetix; CVCL_1656 | ||||||||||||||||||
Sequence databases | EGA; EGAS00001000978 | ||||||||||||||||||
Entry history | |||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||
Last entry update | 16-Dec-2021 | ||||||||||||||||||
Version number | 26 |