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Cellosaurus RF-48 (CVCL_1657)

Cell line name RF-48
Synonyms RF48
Accession CVCL_1657
Resource Identification Initiative To cite this cell line use: RF-48 (RRID:CVCL_1657)
Comments Problematic cell line: Misidentified. From a B-cell lymphoma and not from a gastric cancer (PubMed=12226758).
Part of: Cancer Cell Line Encyclopedia (CCLE) project.
Part of: COSMIC cell lines project.
Microsatellite instability: Stable (MSS) (Sanger).
Omics: Deep exome analysis.
Omics: DNA methylation analysis.
Omics: Transcriptome analysis.
Disease Lymphoma (NCIt: C3208)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_3580 ! RF-1
Sex of cell Male
Age at sampling 62Y
Category Cancer cell line
STR profile Source(s): ATCC; Cosmic-CLP

Markers:
AmelogeninX,Y
CSF1PO11
D5S81811,12
D7S82010,12
D13S31712
D16S53911,13
TH017,8
TPOX8,12
vWA15,16
Publications

PubMed=12226758; DOI=10.1038/sj.onc.1205829
Ji J., Chen X., Leung S.Y., Chi J.-T.A., Chu K.M., Yuen S.T., Li R., Chan A.S.Y., Li J., Dunphy N., So S.
Comprehensive analysis of the gene expression profiles in human gastric cancer cell lines.
Oncogene 21:6549-6556(2002)

PubMed=27397505; DOI=10.1016/j.cell.2016.06.017
Iorio F., Knijnenburg T.A., Vis D.J., Bignell G.R., Menden M.P., Schubert M., Aben N., Goncalves E., Barthorpe S., Lightfoot H., Cokelaer T., Greninger P., van Dyk E., Chang H., de Silva H., Heyn H., Deng X., Egan R.K., Liu Q., Mironenko T., Mitropoulos X., Richardson L., Wang J., Zhang T., Moran S., Sayols S., Soleimani M., Tamborero D., Lopez-Bigas N., Ross-Macdonald P., Esteller M., Gray N.S., Haber D.A., Stratton M.R., Benes C.H., Wessels L.F.A., Saez-Rodriguez J., McDermott U., Garnett M.J.
A landscape of pharmacogenomic interactions in cancer.
Cell 166:740-754(2016)

Cross-references
Cell line collections ATCC; CRL-1863 - Discontinued
IZSLER; BS TCL 208
Cell line databases/resources CCLE; RF48_STOMACH
Cosmic-CLP; 909697
GDSC; 909697
LINCS_LDP; LCL-1896
Biological sample resources BioSample; SAMN03471256
Gene expression databases ArrayExpress; E-MTAB-3610
GEO; GSM1670375
Other Wikidata; Q54949801
Polymorphism and mutation databases Cosmic; 909697