Cellosaurus SKG-IIIa (CVCL_1704)

Cell line name SKG-IIIa
Synonyms SKG-IIIA; SKG IIIa; SKG-3a; SKG3A; SKG3a
Accession CVCL_1704
Resource Identification Initiative To cite this cell line use: SKG-IIIa (RRID:CVCL_1704)
Comments Microsatellite instability: Stable (MSS) (Sanger).
Transformant: NCBI_TaxID; 333760; Human papillomavirus type 16 (HPV16).
Omics: Deep exome analysis.
Omics: DNA methylation analysis.
Omics: Transcriptome analysis.
Disease Human papillomavirus-related cervical squamous cell carcinoma (NCIt: C27676)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_2795 ! SKG-IIIb
Sex of cell Female
Category Cancer cell line
STR profile Source(s): Cosmic-CLP; JCRB; PubMed=25877200; RCB; TKG

Markers:
AmelogeninX
CSF1PO11,12
D13S31712
D16S5399,11
D18S5116
D19S43313
D21S1131.2,32.2
D2S133819,26
D3S135816
D5S81810,11
D7S82010 (JCRB)
10,12 (Cosmic-CLP; PubMed=25877200; RCB; TKG)
D8S117911,15
FGA21,22
Penta D9
Penta E10
TH016,9
TPOX8,11
vWA16
Publications

PubMed=6699456
Udagawa Y., Nozawa S., Tsukazaki K., Ohta H., Akiba T., Kurihara S.
Biological properties of two newly established cell lines (SKG-3a,3b) from a human uterine cervical epidermoid carcinoma.
Nippon Sanka Fujinka Gakkai Zasshi 36:237-246(1984)

PubMed=8380785; DOI=10.1006/gyno.1993.1016
Iwasaka T., Oh-uchida M., Matsuo N., Yokoyama M., Fukuda K., Hara K., Fukuyama K., Hori K., Sugimori H.
Correlation between HPV positivity and state of the p53 gene in cervical carcinoma cell lines.
Gynecol. Oncol. 48:104-109(1993)

PubMed=9290701; DOI=10.1002/(SICI)1098-2744(199708)19:4<243::AID-MC5>3.0.CO;2-D
Jia L.-Q., Osada M., Ishioka C., Gamo M., Ikawa S., Suzuki T., Shimodaira H., Niitani T., Kudo T., Akiyama M., Kimura N., Matsuo M., Mizusawa H., Tanaka N., Koyama H., Namba M., Kanamaru R., Kuroki T.
Screening the p53 status of human cell lines using a yeast functional assay.
Mol. Carcinog. 19:243-253(1997)

PubMed=15099960; DOI=10.1016/j.ygyno.2004.02.012
Fujimoto T., Nishikawa A., Iwasaki M., Akutagawa N., Teramoto M., Kudo R.
Gene expression profiling in two morphologically different uterine cervical carcinoma cell lines derived from a single donor using a human cancer cDNA array.
Gynecol. Oncol. 93:446-453(2004)

PubMed=27397505; DOI=10.1016/j.cell.2016.06.017
Iorio F., Knijnenburg T.A., Vis D.J., Bignell G.R., Menden M.P., Schubert M., Aben N., Goncalves E., Barthorpe S., Lightfoot H., Cokelaer T., Greninger P., van Dyk E., Chang H., de Silva H., Heyn H., Deng X., Egan R.K., Liu Q., Mironenko T., Mitropoulos X., Richardson L., Wang J., Zhang T., Moran S., Sayols S., Soleimani M., Tamborero D., Lopez-Bigas N., Ross-Macdonald P., Esteller M., Gray N.S., Haber D.A., Stratton M.R., Benes C.H., Wessels L.F.A., Saez-Rodriguez J., McDermott U., Garnett M.J.
A landscape of pharmacogenomic interactions in cancer.
Cell 166:740-754(2016)

Cross-references
Cell line collections IFO; IFO50310
JCRB; JCRB0232
RCB; RCB1892
TKG; TKG 0462
Cell line databases/resources Cosmic-CLP; 930298
GDSC; 930298
LINCS_LDP; LCL-1804
Ontologies CLO; CLO_0050923
Biological sample resources BioSample; SAMN01821739
BioSample; SAMN03470894
BioSample; SAMN03471660
Chemistry resources ChEMBL-Cells; CHEMBL3308786
ChEMBL-Targets; CHEMBL1075581
Gene expression databases GEO; GSM1670429
Polymorphism and mutation databases Cosmic; 877461
Cosmic; 930298
Cosmic; 1152539
Cosmic; 1995630