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Cellosaurus COLO 829BL (CVCL_1999)

[Text version]
Cell line name COLO 829BL
Synonyms COLO-829BL; COLO-829-BL; COLO 829 BL; COLO829-BL; COLO829BL; Colorado 829BL
Accession CVCL_1999
Resource Identification Initiative To cite this cell line use: COLO 829BL (RRID:CVCL_1999)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Population: Caucasian.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Deep exome analysis.
Omics: Genome sequenced.
Omics: SNP array analysis.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Cell type: B-cell; CL=CL_0000236.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_1137 ! COLO 829
CVCL_L503 ! COLO 831
CVCL_2000 ! COLO 832
CVCL_L504 ! COLO 833
CVCL_L505 ! COLO 834
CVCL_L506 ! COLO 835
CVCL_L507 ! COLO 838
CVCL_2001 ! COLO 839
CVCL_L508 ! COLO 845
CVCL_L509 ! COLO 848
CVCL_2002 ! COLO 849
CVCL_2003 ! COLO 853
CVCL_2004 ! COLO 857
CVCL_2005 ! COLO 858
Sex of cell Male
Age at sampling 45Y
Category Transformed cell line
STR profile Source(s): ATCC

Markers:
AmelogeninX,Y
CSF1PO11,13
D2S133818,26
D3S135816,18
D5S81811,12
D7S8208,10
D8S117913,14
D13S31711,12
D16S53911,13
D18S5115
D19S43314,15
D21S1127,29
FGA21,25
Penta D9,14
Penta E7,12
TH0110
TPOX8,11
vWA17,19

Run an STR similarity search on this cell line
Publications

PubMed=14762065; DOI=10.1101/gr.2012304
Bignell G.R., Huang J., Greshock J., Watt S., Butler A.P., West S., Grigorova M., Jones K.W., Wei W., Stratton M.R., Futreal P.A., Weber B., Shapero M.H., Wooster R.
High-resolution analysis of DNA copy number using oligonucleotide microarrays.
Genome Res. 14:287-295(2004)

PubMed=20016485; DOI=10.1038/nature08658
Pleasance E.D., Cheetham R.K., Stephens P.J., McBride D.J., Humphray S.J., Greenman C.D., Varela I., Lin M.-L., Ordonez G.R., Bignell G.R., Ye K., Alipaz J., Bauer M.J., Beare D., Butler A.P., Carter R.J., Chen L., Cox A.J., Edkins S., Kokko-Gonzales P.I., Gormley N.A., Grocock R.J., Haudenschild C.D., Hims M.M., James T., Jia M.-M., Kingsbury Z., Leroy C., Marshall J., Menzies A., Mudie L.J., Ning Z.-M., Royce T., Schulz-Trieglaff O.B., Spiridou A., Stebbings L.A., Szajkowski L., Teague J.W., Williamson D., Chin L., Ross M.T., Campbell P.J., Bentley D.R., Futreal P.A., Stratton M.R.
A comprehensive catalogue of somatic mutations from a human cancer genome.
Nature 463:191-196(2010)

PubMed=20164919; DOI=10.1038/nature08768
Bignell G.R., Greenman C.D., Davies H., Butler A.P., Edkins S., Andrews J.M., Buck G., Chen L., Beare D., Latimer C., Widaa S., Hinton J., Fahey C., Fu B.-Y., Swamy S., Dalgliesh G.L., Teh B.T., Deloukas P., Yang F.-T., Campbell P.J., Futreal P.A., Stratton M.R.
Signatures of mutation and selection in the cancer genome.
Nature 463:893-898(2010)

PubMed=27094764; DOI=10.1038/srep24607
Craig D.W., Nasser S., Corbett R., Chan S.K., Murray L., Legendre C., Tembe W., Adkins J., Kim N., Wong S.-M., Baker A., Enriquez D., Pond S., Pleasance E.D., Mungall A.J., Moore R.A., McDaniel T., Ma Y., Jones S.J.M., Marra M.A., Carpten J.D., Liang W.S.
A somatic reference standard for cancer genome sequencing.
Sci. Rep. 6:24607-24607(2016)

Cross-references
Cell line collections (Providers) ATCC; CRL-1980
Cell line databases/resources CLO; CLO_0002564
Cell_Model_Passport; SIDM00908
DepMap; ACH-002380
Biological sample resources BioSample; SAMN03471268
Encyclopedic resources Wikidata; Q54814158
Sequence databases dbGAP; phs001839.v1.p1
EGA; EGAS00000000052
Entry history
Entry creation04-Apr-2012
Last entry update05-Oct-2023
Version number23