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Cellosaurus COLO 853 (CVCL_2003)

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Cell line name COLO 853
Synonyms COLO-853; Colo 853
Accession CVCL_2003
Resource Identification Initiative To cite this cell line use: COLO 853 (RRID:CVCL_2003)
Comments Omics: Deep RNAseq analysis.
Omics: SNP array analysis.
Disease Cutaneous melanoma (NCIt: C3510)
Derived from metastatic site: Right axillary lymph node.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_1137 ! COLO 829
CVCL_1999 ! COLO 829BL
CVCL_L503 ! COLO 831
CVCL_2000 ! COLO 832
CVCL_L504 ! COLO 833
CVCL_L505 ! COLO 834
CVCL_L506 ! COLO 835
CVCL_L507 ! COLO 838
CVCL_2001 ! COLO 839
CVCL_L508 ! COLO 845
CVCL_L509 ! COLO 848
CVCL_2002 ! COLO 849
CVCL_2004 ! COLO 857
CVCL_2005 ! COLO 858
Sex of cell Male
Age at sampling 43Y
Category Cancer cell line
STR profile Source(s): ECACC

Markers:
AmelogeninX
CSF1PO11
D5S81811
D7S8208,10
D13S31711,12
D16S53913
TH0110
TPOX8,11
vWA17,19

Run an STR similarity search on this cell line
Publications

PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458
Rothenberg S.M., Mohapatra G., Rivera M.N., Winokur D., Greninger P., Nitta M., Sadow P.M., Sooriyakumar G., Brannigan B.W., Ulman M.J., Perera R.M., Wang R., Tam A., Ma X.-J., Erlander M., Sgroi D.C., Rocco J.W., Lingen M.W., Cohen E.E.W., Louis D.N., Settleman J., Haber D.A.
A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers.
Cancer Res. 70:2158-2164(2010)

PubMed=25485619; DOI=10.1038/nbt.3080
Klijn C., Durinck S., Stawiski E.W., Haverty P.M., Jiang Z., Liu H., Degenhardt J., Mayba O., Gnad F., Liu J., Pau G., Reeder J., Cao Y., Mukhyala K., Selvaraj S.K., Yu M., Zynda G.J., Brauer M.J., Wu T.D., Gentleman R.C., Manning G., Yauch R.L., Bourgon R., Stokoe D., Modrusan Z., Neve R.M., de Sauvage F.J., Settleman J., Seshagiri S., Zhang Z.
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

Cross-references
Cell line collections ECACC; 93052606
ICLC; HTL96001
Cell line databases/resources CLDB; cl859
CLDB; cl860
LINCS_LDP; LCL-1240
Ontologies CLO; CLO_0002567
EFO; EFO_0006380
Chemistry resources PharmacoDB; COLO853_219_2019
Gene expression databases ArrayExpress; E-MTAB-2706
GEO; GSM827310
Other Wikidata; Q54814169
Entry history
Entry creation04-Apr-2012
Last entry updated06-Sep-2019
Version number17