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Cellosaurus COLO 857 (CVCL_2004)

[Text version]

Cell line name COLO 857
Synonyms COLO-857; Colo 857; COLO857
Accession CVCL_2004
Resource Identification Initiative To cite this cell line use: COLO 857 (RRID:CVCL_2004)
Comments Omics: Deep RNAseq analysis.
Omics: SNP array analysis.
Disease Cutaneous melanoma (NCIt: C3510)
Derived from metastatic site: Right axillary lymph node.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_1137 ! COLO 829
CVCL_1999 ! COLO 829BL
CVCL_L503 ! COLO 831
CVCL_2000 ! COLO 832
CVCL_L504 ! COLO 833
CVCL_L505 ! COLO 834
CVCL_L506 ! COLO 835
CVCL_L507 ! COLO 838
CVCL_2001 ! COLO 839
CVCL_L508 ! COLO 845
CVCL_L509 ! COLO 848
CVCL_2002 ! COLO 849
CVCL_2003 ! COLO 853
CVCL_2005 ! COLO 858
Sex of cell Male
Age at sampling 43Y
Category Cancer cell line
STR profile Source(s): ECACC; PubMed=25877200

Markers:
AmelogeninX
CSF1PO11
D3S135816,18
D5S81811
D7S8208,10
D8S117913,14
D13S31711,12
D16S53913
D18S5115
D21S1129
FGA25
Penta D9
Penta E7,12
TH0110
TPOX8,11
vWA17,19 (ECACC)
17,18,19 (PubMed=25877200)

Run an STR similarity search on this cell line
Publications

PubMed=7780963
Easty D.J., Guthrie B.A., Maung K., Farr C.J., Lindberg R.A., Toso R.J., Herlyn M., Bennett D.C.
Protein B61 as a new growth factor: expression of B61 and up-regulation of its receptor epithelial cell kinase during melanoma progression.
Cancer Res. 55:2528-2532(1995)

PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458
Rothenberg S.M., Mohapatra G., Rivera M.N., Winokur D., Greninger P., Nitta M., Sadow P.M., Sooriyakumar G., Brannigan B.W., Ulman M.J., Perera R.M., Wang R., Tam A., Ma X.-J., Erlander M., Sgroi D.C., Rocco J.W., Lingen M.W., Cohen E.E.W., Louis D.N., Settleman J., Haber D.A.
A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers.
Cancer Res. 70:2158-2164(2010)

PubMed=25485619; DOI=10.1038/nbt.3080
Klijn C., Durinck S., Stawiski E.W., Haverty P.M., Jiang Z., Liu H., Degenhardt J., Mayba O., Gnad F., Liu J., Pau G., Reeder J., Cao Y., Mukhyala K., Selvaraj S.K., Yu M., Zynda G.J., Brauer M.J., Wu T.D., Gentleman R.C., Manning G., Yauch R.L., Bourgon R., Stokoe D., Modrusan Z., Neve R.M., de Sauvage F.J., Settleman J., Seshagiri S., Zhang Z.
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

Cross-references
Cell line collections ECACC; 93051120
Cell line databases/resources CLDB; cl861
LINCS_LDP; LCL-1241
Ontologies CLO; CLO_0002568
EFO; EFO_0006381
Biological sample resources BioSample; SAMN03472866
Gene expression databases ArrayExpress; E-MTAB-2706
GEO; GSM827425
Other Wikidata; Q54814170
Polymorphism and mutation databases Cosmic; 972258
Entry history
Entry creation04-Apr-2012
Last entry updated07-Sep-2018
Version number16