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Cellosaurus COLO 857 (CVCL_2004)

[Text version]

Cell line name COLO 857
Synonyms COLO-857; Colo 857; COLO857; Colorado 857
Accession CVCL_2004
Resource Identification Initiative To cite this cell line use: COLO 857 (RRID:CVCL_2004)
Comments Population: Caucasian.
Omics: Deep RNAseq analysis.
Omics: SNP array analysis.
Disease Cutaneous melanoma (NCIt: C3510)
Derived from metastatic site: Right axillary lymph node.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_1137 ! COLO 829
CVCL_1999 ! COLO 829BL
CVCL_L503 ! COLO 831
CVCL_2000 ! COLO 832
CVCL_L504 ! COLO 833
CVCL_L505 ! COLO 834
CVCL_L506 ! COLO 835
CVCL_L507 ! COLO 838
CVCL_2001 ! COLO 839
CVCL_L508 ! COLO 845
CVCL_L509 ! COLO 848
CVCL_2002 ! COLO 849
CVCL_2003 ! COLO 853
CVCL_2005 ! COLO 858
Sex of cell Male
Age at sampling 43Y
Category Cancer cell line
STR profile Source(s): ECACC; PubMed=25877200

Markers:
AmelogeninX
CSF1PO11
D3S135816,18
D5S81811
D7S8208,10
D8S117913,14
D13S31711,12
D16S53913
D18S5115
D21S1129
FGA25
Penta D9
Penta E7,12
TH0110
TPOX8,11
vWA17,18,19 (PubMed=25877200)
17,19 (ECACC)

Run an STR similarity search on this cell line
Publications

PubMed=7780963
Easty D.J., Guthrie B.A., Maung K., Farr C.J., Lindberg R.A., Toso R.J., Herlyn M., Bennett D.C.
Protein B61 as a new growth factor: expression of B61 and up-regulation of its receptor epithelial cell kinase during melanoma progression.
Cancer Res. 55:2528-2532(1995)

PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458
Rothenberg S.M., Mohapatra G., Rivera M.N., Winokur D., Greninger P., Nitta M., Sadow P.M., Sooriyakumar G., Brannigan B.W., Ulman M.J., Perera R.M., Wang R., Tam A., Ma X.-J., Erlander M., Sgroi D.C., Rocco J.W., Lingen M.W., Cohen E.E.W., Louis D.N., Settleman J., Haber D.A.
A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers.
Cancer Res. 70:2158-2164(2010)

PubMed=25485619; DOI=10.1038/nbt.3080
Klijn C., Durinck S., Stawiski E.W., Haverty P.M., Jiang Z.-S., Liu H.-B., Degenhardt J., Mayba O., Gnad F., Liu J.-F., Pau G., Reeder J., Cao Y., Mukhyala K., Selvaraj S.K., Yu M.-M., Zynda G.J., Brauer M.J., Wu T.D., Gentleman R.C., Manning G., Yauch R.L., Bourgon R., Stokoe D., Modrusan Z., Neve R.M., de Sauvage F.J., Settleman J., Seshagiri S., Zhang Z.-M.
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

Cross-references
Cell line collections ECACC; 93051120
Cell line databases/resources CLDB; cl861
LINCS_LDP; LCL-1241
Ontologies CLO; CLO_0002568
EFO; EFO_0006381
Biological sample resources BioSample; SAMN03472866
Chemistry resources PharmacoDB; COLO857_220_2019
Gene expression databases ArrayExpress; E-MTAB-2706
GEO; GSM827425
Other Wikidata; Q54814170
Polymorphism and mutation databases Cosmic; 972258
Progenetix; CVCL_2004
Entry history
Entry creation04-Apr-2012
Last entry update20-May-2021
Version number19