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Cellosaurus ESO-26 (CVCL_2035)

[Text version]

Cell line name ESO-26
Synonyms ESO26
Accession CVCL_2035
Resource Identification Initiative To cite this cell line use: ESO-26 (RRID:CVCL_2035)
Comments Part of: Cancer Cell Line Encyclopedia (CCLE) project.
Part of: COSMIC cell lines project.
Doubling time: ~35-50 hours (DSMZ).
Microsatellite instability: Instable (MSI-low) (Sanger).
Omics: Deep exome analysis.
Omics: DNA methylation analysis.
Omics: Genome sequenced.
Omics: Transcriptome analysis.
Sequence variations TP53 p.Arg248Trp (c.742C>T) (PubMed=20075370).
Genome ancestry Source: PubMed=30894373

Origin% genome
African3.22
Native American0
East Asian, North0
East Asian, South2.45
South Asian0.14
European, North50.67
European, South43.52
Disease Gastroesophageal junction adenocarcinoma (NCIt: C9296)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 56Y
Category Cancer cell line
STR profile Source(s): Cosmic-CLP; DSMZ; ECACC; PubMed=20075370

Markers:
AmelogeninX,Y
CSF1PO9,10
D3S135815
D5S81812
D7S82011
D8S117913,14
D13S3179,11
D16S5399
D18S5117
D21S1130
FGA21
Penta D10
Penta E12,14
TH019
TPOX7,9
vWA14,18

Run an STR similarity search on this cell line
Publications

PubMed=20075370; DOI=10.1093/jnci/djp499
Boonstra J.J., van Marion R., Beer D.G., Lin L., Chaves P., Ribeiro C., Pereira A.D., Roque L., Darnton S.J., Altorki N.K., Schrump D.S., Klimstra D.S., Tang L.H., Eshleman J.R., Alvarez H., Shimada Y., van Dekken H., Tilanus H.W., Dinjens W.N.M.
Verification and unmasking of widely used human esophageal adenocarcinoma cell lines.
J. Natl. Cancer Inst. 102:271-274(2010)

PubMed=23795680; DOI=10.1111/dote.12095
Boonstra J.J., Tilanus H.W., Dinjens W.N.M.
Translational research on esophageal adenocarcinoma: from cell line to clinic.
Dis. Esophagus 28:90-96(2015)

DOI=10.12688/f1000research.7033.1
Contino G., Eldridge M.D., Secrier M., Bower L., Elliott R.F., Weaver J., Lynch A.G., Edwards P.A.W., Fitzgerald R.C.
Whole-genome sequencing of nine esophageal adenocarcinoma cell lines.
F1000Research 5:1336-1336(2016)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747
Dutil J., Chen Z., Monteiro A.N., Teer J.K., Eschrich S.A.
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

Cross-references
Cell line collections DSMZ; ACC-708
ECACC; 11012009
Cell line databases/resources CCLE; ESO26_OESOPHAGUS
Cell_Model_Passport; SIDM00539
Cosmic-CLP; 1503366
DepMap; ACH-001496
GDSC; 1503366
Biological sample resources BioSample; SAMN03473393
Chemistry resources PharmacoDB; ESO26_345_2019
Gene expression databases ArrayExpress; E-MTAB-3610
GEO; GSM1669776
Other Wikidata; Q54832832
Polymorphism and mutation databases Cosmic; 1599336
Entry history
Entry creation04-Apr-2012
Last entry updated06-Sep-2019
Version number20