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Cellosaurus NCC-StC-K140 (CVCL_3055)

[Text version]

Cell line name NCC-StC-K140
Synonyms NCCStCK140; NCCSTCK140; K140
Accession CVCL_3055
Resource Identification Initiative To cite this cell line use: NCC-StC-K140 (RRID:CVCL_3055)
Comments Part of: Cancer Cell Line Encyclopedia (CCLE) project.
Doubling time: ~44 hours (lot 03222018) (JCRB).
Omics: Deep exome analysis.
Omics: Deep RNAseq analysis.
Omics: SNP array analysis.
Genome ancestry Source: PubMed=30894373

Origin% genome
African1.19
Native American0
East Asian, North80.7
East Asian, South13.81
South Asian0
European, North0
European, South4.29
Disease Gastric carcinoma (NCIt: C4911)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling 36Y
Category Cancer cell line
STR profile Source(s): JCRB; RCB

Markers:
AmelogeninX
CSF1PO10
D5S8189
D7S82011,12 (JCRB)
12 (RCB)
D13S31712
D16S53912
TH017,9
TPOX8,11
vWA14

Run an STR similarity search on this cell line
Publications

PubMed=8263010; DOI=10.1007/BF01202193
Inomata M., Kaneko A., Saijo N., Tokura S.
Culture of retinoblastoma cells from clinical specimens: growth-promoting effect of 2-mercaptoethanol.
J. Cancer Res. Clin. Oncol. 120:149-155(1994)

PubMed=22460905; DOI=10.1038/nature11003
Barretina J.G., Caponigro G., Stransky N., Venkatesan K., Margolin A.A., Kim S., Wilson C.J., Lehar J., Kryukov G.V., Sonkin D., Reddy A., Liu M., Murray L., Berger M.F., Monahan J.E., Morais P., Meltzer J., Korejwa A., Jane-Valbuena J., Mapa F.A., Thibault J., Bric-Furlong E., Raman P., Shipway A., Engels I.H., Cheng J., Yu G.K., Yu J., Aspesi P. Jr., de Silva M., Jagtap K., Jones M.D., Wang L., Hatton C., Palescandolo E., Gupta S., Mahan S., Sougnez C., Onofrio R.C., Liefeld T., MacConaill L.E., Winckler W., Reich M., Li N., Mesirov J.P., Gabriel S.B., Getz G., Ardlie K., Chan V., Myer V.E., Weber B.L., Porter J., Warmuth M., Finan P., Harris J.L., Meyerson M., Golub T.R., Morrissey M.P., Sellers W.R., Schlegel R., Garraway L.A.
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity.
Nature 483:603-607(2012)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747
Dutil J., Chen Z., Monteiro A.N., Teer J.K., Eschrich S.A.
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

PubMed=31068700; DOI=10.1038/s41586-019-1186-3
Ghandi M., Huang F.W., Jane-Valbuena J., Kryukov G.V., Lo C.C., McDonald E.R. III, Barretina J., Gelfand E.T., Bielski C.M., Li H., Hu K., Andreev-Drakhlin A.Y., Kim J., Hess J.M., Haas B.J., Aguet F., Weir B.A., Rothberg M.V., Paolella B.R., Lawrence M.S., Akbani R., Lu Y., Tiv H.L., Gokhale P.C., de Weck A., Mansour A.A., Oh C., Shih J., Hadi K., Rosen Y., Bistline J., Venkatesan K., Reddy A., Sonkin D., Liu M., Lehar J., Korn J.M., Porter D.A., Jones M.D., Golji J., Caponigro G., Taylor J.E., Dunning C.M., Creech A.L., Warren A.C., McFarland J.M., Zamanighomi M., Kauffmann A., Stransky N., Imielinski M., Maruvka Y.E., Cherniack A.D., Tsherniak A., Vazquez F., Jaffe J.D., Lane A.A., Weinstock D.M., Johannessen C.M., Morrissey M.P., Stegmeier F., Schlegel R., Hahn W.C., Getz G., Mills G.B., Boehm J.S., Golub T.R., Garraway L.A., Sellers W.R.
Next-generation characterization of the Cancer Cell Line Encyclopedia.
Nature 569:503-508(2019)

Cross-references
Cell line collections JCRB; JCRB1228
RCB; RCB2224
Cell line databases/resources CCLE; NCCSTCK140_STOMACH
DepMap; ACH-000110
Ontologies CLO; CLO_0050803
Biological sample resources BioSample; SAMN03472022
BioSample; SAMN03472448
BioSample; SAMN10988058
Chemistry resources PharmacoDB; NCCStCK140_996_2019
Gene expression databases ArrayExpress; E-MTAB-2770
GEO; GSM888427
Other Wikidata; Q54907635
Polymorphism and mutation databases LiGeA; CCLE_272
Entry history
Entry creation04-Apr-2012
Last entry updated06-Sep-2019
Version number14