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Cellosaurus HCC2688 (CVCL_3376)

[Text version]

Cell line name HCC2688
Accession CVCL_3376
Resource Identification Initiative To cite this cell line use: HCC2688 (RRID:CVCL_3376)
Comments Omics: CNV analysis.
Omics: Deep RNAseq analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis.
Disease Breast ductal carcinoma (NCIt: C4017)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling Age unspecified
Category Cancer cell line
STR profile Source(s): PubMed=20679594; PubMed=25877200

Markers:
AmelogeninX
CSF1PO10
D3S135815
D5S81813
D7S8209
D8S117913
D13S3178
D16S53912
D18S5113
D21S1127,31.2
FGA20
Penta D11,13
Penta E12
TH016
TPOX8
vWA14,15

Run an STR similarity search on this cell line
Web pages http://www.utsouthwestern.edu/edumedia/edufiles/about_us/admin_offices/technology_development/available_technologies/cell-lines.pdf
Publications

PubMed=19582160; DOI=10.1371/journal.pone.0006146
Kao J., Salari K., Bocanegra M., Choi Y.-L., Girard L., Gandhi J., Kwei K.A., Hernandez-Boussard T., Wang P., Gazdar A.F., Minna J.D., Pollack J.R.
Molecular profiling of breast cancer cell lines defines relevant tumor models and provides a resource for cancer gene discovery.
PLoS ONE 4:E6146-E6146(2009)

PubMed=20679594; DOI=10.1093/jnci/djq279
Gazdar A.F., Girard L., Lockwood W.W., Lam W.L., Minna J.D.
Lung cancer cell lines as tools for biomedical discovery and research.
J. Natl. Cancer Inst. 102:1310-1321(2010)

PubMed=25485619; DOI=10.1038/nbt.3080
Klijn C., Durinck S., Stawiski E.W., Haverty P.M., Jiang Z.-S., Liu H.-B., Degenhardt J., Mayba O., Gnad F., Liu J.-F., Pau G., Reeder J., Cao Y., Mukhyala K., Selvaraj S.K., Yu M.-M., Zynda G.J., Brauer M.J., Wu T.D., Gentleman R.C., Manning G., Yauch R.L., Bourgon R., Stokoe D., Modrusan Z., Neve R.M., de Sauvage F.J., Settleman J., Seshagiri S., Zhang Z.-M.
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

Cross-references
Cell line databases/resources DepMap; ACH-002323
Ontologies EFO; EFO_0006433
Biological sample resources BioSample; SAMN03473199
Chemistry resources PharmacoDB; HCC2688_493_2019
Gene expression databases ArrayExpress; E-MTAB-2706
GEO; GSM350545
Other Wikidata; Q54881664
Polymorphism and mutation databases Progenetix; CVCL_3376
Entry history
Entry creation04-Apr-2012
Last entry update20-May-2021
Version number16