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Cellosaurus BJ [Human fibroblast] (CVCL_3653)

Cell line name BJ [Human fibroblast]
Synonyms FF-WT-BJ; BJ1
Accession CVCL_3653
Resource Identification Initiative To cite this cell line use: BJ [Human fibroblast] (RRID:CVCL_3653)
Comments Part of: ENCODE project common cell types; tier 3.
Characteristics: Senesces at 72 PDL. Has a long lifespan in comparison with other normal human fibroblast cell lines (ATCC).
Omics: DNA methylation analysis.
Omics: H3K4me3 ChIP-seq epigenome analysis.
Omics: H3K27me3 ChIP-seq epigenome analysis.
Omics: H3K36me3 ChIP-seq epigenome analysis.
Omics: Transcriptome analysis.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_C243 (246G1)CVCL_C244 (246G3)CVCL_C245 (246G4)
CVCL_C246 (246G5)CVCL_C247 (246G6)CVCL_DQ33 (346D1)
CVCL_DQ34 (346E1)CVCL_DQ35 (346E2)CVCL_DQ36 (346F1)
CVCL_DQ37 (363G1)CVCL_VG15 (4BJ1)CVCL_VG16 (5B1)
CVCL_VG17 (7B1)CVCL_VG18 (7B6)CVCL_C623 (B12-11)
CVCL_C620 (B12-2)CVCL_C621 (B12-3)CVCL_C622 (B12-6)
CVCL_C624 (B124-1)CVCL_C626 (B124-10)CVCL_C627 (B124-13)
CVCL_C625 (B124-2)CVCL_X732 (BJ epi iPS-C)CVCL_6D12 (BJ hiPSC #11)
CVCL_6D13 (BJ hiPSC #12)CVCL_6D14 (BJ hiPSC #5)CVCL_6D15 (BJ hiPSC #8)
CVCL_X737 (BJ RiPS-A)CVCL_X738 (BJ RiPS-D)CVCL_X739 (BJ RiPS-E)
CVCL_C922 (BJ-RiPS-1.1)CVCL_C923 (BJ-RiPS-1.2)CVCL_C924 (BJ-RiPS-1.3)
CVCL_6573 (BJ1-hTERT)CVCL_C921 (BJ1-iPS1)CVCL_V235 (BJ1-iPS3)
CVCL_0G92 (BJC)CVCL_0G93 (BJD)CVCL_0G85 (eWT-BJ2)
CVCL_0G86 (eWT-BJ4)CVCL_QX15 (HNL1)CVCL_RL51 (HNL2)
CVCL_RL52 (HNL4)CVCL_RL53 (HNL5)CVCL_RL54 (HNL6)
CVCL_RL55 (HNLp)CVCL_C430 (IPS(Foreskin)-1)CVCL_C431 (IPS(Foreskin)-2)
CVCL_C432 (IPS(Foreskin)-3)CVCL_C433 (IPS(Foreskin)-4)CVCL_RL56 (T10)
CVCL_RL57 (T11 [Human ESC])
Sex of cell Male
Age at sampling <1M
Category Finite cell line
STR profile Source(s): ATCC

Markers:
AmelogeninX,Y
CSF1PO10,12
D13S3178,9
D16S5399,13
D5S81812
D7S82011,12
TH017,8
TPOX10,11
vWA16,18
Web pages https://strap.nci.nih.gov/celline_detail.php?sample_id=67
http://genome.ucsc.edu/ENCODE/protocols/cell/human/BJ_Stam_protocol.pdf
Publications

PubMed=23325432; DOI=10.1101/gr.147942.112
Varley K.E., Gertz J., Bowling K.M., Parker S.L., Reddy T.E., Pauli-Behn F., Cross M.K., Williams B.A., Stamatoyannopoulos J.A., Crawford G.E., Absher D.M., Wold B.J., Myers R.M.
Dynamic DNA methylation across diverse human cell lines and tissues.
Genome Res. 23:555-567(2013)

Cross-references
Cell line collections AddexBio; P0012005/4972
ATCC; CRL-2522
Cell line databases/resources Lonza; 723
TOKU-E; 672
Ontologies BTO; BTO:0003807
CLO; CLO_0001980
EFO; EFO_0002779
Biological sample resources ENCODE; ENCBS070WLP
ENCODE; ENCBS074ENC
ENCODE; ENCBS137RRI
ENCODE; ENCBS170GUW
ENCODE; ENCBS198NMJ
ENCODE; ENCBS335XLL
ENCODE; ENCBS339MSO
ENCODE; ENCBS610AAA
ENCODE; ENCBS611AAA
ENCODE; ENCBS612AAA
ENCODE; ENCBS613AAA
ENCODE; ENCBS614AAA
ENCODE; ENCBS615AAA
ENCODE; ENCBS616AAA
ENCODE; ENCBS683XYV
ENCODE; ENCBS753AAA
ENCODE; ENCBS754AAA
ENCODE; ENCBS772THG
ENCODE; ENCBS815JWZ
ENCODE; ENCBS911DVL
ENCODE; ENCBS935PZD
Chemistry resources ChEMBL-Cells; CHEMBL3307781
ChEMBL-Targets; CHEMBL614358
Gene expression databases GEO; GSM248213
GEO; GSM248214
GEO; GSM472898
GEO; GSM472924
GEO; GSM472925
GEO; GSM579886
GEO; GSM579887
GEO; GSM736518
GEO; GSM736596
GEO; GSM749677
GEO; GSM749752
GEO; GSM923444
GEO; GSM945178
GEO; GSM945204
GEO; GSM945207
GEO; GSM945235
Other Wikidata; Q54796903