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Cellosaurus UM-SCC-104 (CVCL_7712)

[Text version]
Cell line name UM-SCC-104
Synonyms UMSCC-104; UMSCC104; University of Michigan-Squamous Cell Carcinoma-104
Accession CVCL_7712
Resource Identification Initiative To cite this cell line use: UM-SCC-104 (RRID:CVCL_7712)
Comments Doubling time: 48 hours (PubMed=22162267); 2.6 days (PubMed=29156801).
Transformant: NCBI_TaxID; 333760; Human papillomavirus type 16 (HPV16).
Omics: CNV analysis.
Omics: Deep exome analysis.
Omics: Genome sequenced (low read coverage).
Omics: Protein expression by reverse-phase protein arrays.
Omics: Transcriptome analysis by RNAseq.
Sequence variations
  • Mutation; HGNC; 3595; FAT1; Simple; p.Ile1829Val (c.5485A>G); Zygosity=Homozygous (PubMed=31541927).
  • Mutation; HGNC; 7881; NOTCH1; Simple; p.Ala12Val (c.35C>T); ClinVar=VCV001494610; Zygosity=Homozygous (PubMed=31541927).
Disease Floor of mouth squamous cell carcinoma (NCIt: C4041)
Squamous cell carcinoma of the oral cavity (ORDO: Orphanet_502363)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 56Y
Category Cancer cell line
STR profile Source(s): Millipore; PubMed=22162267; PubMed=29156801

Markers:
AmelogeninX (Millipore)
X,Y (PubMed=22162267; PubMed=29156801)
CSF1PO10 (Millipore; PubMed=22162267)
10,12 (PubMed=29156801)
D2S133817,20
D3S135817
D5S81812
D7S82010
D8S11799,13
D13S3178 (Millipore)
8,9 (PubMed=22162267; PubMed=29156801)
D16S5399 (Millipore; PubMed=22162267)
9,13 (PubMed=29156801)
D18S5113,14
D19S43314,15.2
D21S1130,32.2
FGA24
Penta D9,12
Penta E13
TH016
TPOX9,10
vWA16,17

Run an STR similarity search on this cell line
Publications

PubMed=22162267; DOI=10.1002/hed.21962
Tang A.L., Hauff S.J., Owen J.H., Graham M.P., Czerwinski M.J., Park J.J., Walline H.M., Papagerakis S., Stoerker J., McHugh J.B., Chepeha D.B., Bradford C.R., Carey T.E., Prince M.E.P.
UM-SCC-104: a new human papillomavirus-16-positive cancer stem cell-containing head and neck squamous cell carcinoma cell line.
Head Neck 34:1480-1491(2012)

PubMed=24201445; DOI=10.1101/gr.164806.113
Akagi K., Li J.-F., Broutian T.R., Padilla-Nash H.M., Xiao W.-H., Jiang B., Rocco J.W., Teknos T.N., Kumar B., Wangsa D., He D., Ried T., Symer D.E., Gillison M.L.
Genome-wide analysis of HPV integration in human cancers reveals recurrent, focal genomic instability.
Genome Res. 24:185-199(2014)

PubMed=26045983
Ziemann F., Arenz A., Preising S., Wittekindt C., Klussmann J.P., Engenhart-Cabillic R., Wittig A.
Increased sensitivity of HPV-positive head and neck cancer cell lines to X-irradiation +/- cisplatin due to decreased expression of E6 and E7 oncoproteins and enhanced apoptosis.
Am. J. Cancer Res. 5:1017-1031(2015)

PubMed=28236344; DOI=10.1002/hed.24729
Walline H.M., Goudsmit C.M., McHugh J.B., Tang A.L., Owen J.H., Teh B.T., McKean E.L., Glover T.W., Graham M.P., Prince M.E.P., Chepeha D.B., Chinn S.B., Ferris R.L., Gollin S.M., Hoffmann T.K., Bier H., Brakenhoff R.H., Bradford C.R., Carey T.E.
Integration of high-risk human papillomavirus into cellular cancer-related genes in head and neck cancer cell lines.
Head Neck 39:840-852(2017)

PubMed=29156801; DOI=10.18632/oncotarget.21174
Kalu N.N., Mazumdar T., Peng S.-H., Shen L., Sambandam V., Rao X.-Y., Xi Y.-X., Li L.-R., Qi Y., Gleber-Netto F.O., Patel A., Wang J., Frederick M.J., Myers J.N., Pickering C.R., Johnson F.M.
Genomic characterization of human papillomavirus-positive and -negative human squamous cell cancer cell lines.
Oncotarget 8:86369-86383(2017)

PubMed=31541927; DOI=10.1016/j.oraloncology.2019.09.004
van Harten A.M., Poell J.B., Buijze M., Brink A., Wells S.I., Leemans C.R., Wolthuis R.M.F., Brakenhoff R.H.
Characterization of a head and neck cancer-derived cell line panel confirms the distinct TP53-proficient copy number-silent subclass.
Oral Oncol. 98:53-61(2019)

PubMed=32574978; DOI=10.1016/j.tranon.2020.100808
Nair T.S., Thomas T.B., Yang L., Kakaraparthi B.N., Morris A.C., Clark A.M., Campredon L.P., Brouwer A.F., Eisenberg M.C., Meza R., Carey T.E.
Characteristics of head and neck squamous cell carcinoma cell lines reflect human tumor biology independent of primary etiologies and HPV status.
Transl. Oncol. 13:100808.1-100808.9(2020)

Cross-references
Cell line collections (Providers) Millipore; SCC072
Cell line databases/resources cancercelllines; CVCL_7712
Encyclopedic resources Wikidata; Q54990797
Gene expression databases GEO; GSM3631290
Polymorphism and mutation databases Progenetix; CVCL_7712
Entry history
Entry creation04-Apr-2012
Last entry update05-Oct-2023
Version number22