ID   BG01
AC   CVCL_9726
SY   hESBGN-01; HESBGN-01; BGN-01; BGO1; VIACe001-A; BresaGen 01
DR   EFO; EFO_0007071
DR   ENCODE; ENCBS742FEC
DR   GEO; GSM383872
DR   GEO; GSM384094
DR   GEO; GSM500932
DR   GEO; GSM856719
DR   GEO; GSM862730
DR   GEO; GSM1272755
DR   GEO; GSM1272756
DR   GEO; GSM1272757
DR   GEO; GSM1272758
DR   GEO; GSM1272759
DR   GEO; GSM1272760
DR   hPSCreg; VIACe001-A
DR   ISCR; 62
DR   SKIP; SKIP001938
DR   TOKU-E; 4082
DR   WiCell; bg01
DR   Wikidata; Q54796217
RX   PubMed=12968106;
RX   PubMed=15153607;
RX   PubMed=15684826;
RX   PubMed=16919167;
RX   PubMed=17570852;
RX   PubMed=17572666;
RX   PubMed=18772870;
RX   PubMed=23117585;
RX   PubMed=24172903;
WW   http://stemcells.nih.gov/staticresources/research/protocols/BresaGen_hESC_manual_2.1.pdf
WW   https://stemcelldb.nih.gov/cellLineDetails.do?id=6
CC   From: ViaCyte, Inc. (originally from BresaGen); San Diego; USA.
CC   HLA typing: A*02,03; B*35,49; C*04,07; DQB1*02,03; DRB1*03,04; DRB3*01 (PubMed=16919167).
CC   HLA typing: A*02:01,03:01; B*35:03,49:01; C*04:01,07:01; DQB1*02:01,03:01; DRB1*03:01,04:05 (PubMed=15684826).
CC   Omics: H3K27ac ChIP-seq epigenome analysis.
CC   Omics: H3K27me3 ChIP-seq epigenome analysis.
CC   Omics: H3K4me1 ChIP-seq epigenome analysis.
CC   Omics: H3K4me3 ChIP-seq epigenome analysis.
CC   Omics: H3K9me3 ChIP-seq epigenome analysis.
CC   Omics: Transcriptome analysis by microarray.
CC   Omics: Transcriptome analysis by serial analysis of gene expression (SAGE).
CC   Derived from site: In situ; Blastocyst; UBERON=UBERON_0000358.
CC   Cell type: Embryonic stem cell; CL=CL_0002322.
ST   Source(s): PubMed=15684826; PubMed=16919167; WiCell
ST   Amelogenin: X,Y
ST   CSF1PO: 10
ST   D13S317: 11,12
ST   D16S539: 9,11
ST   D18S51: 19
ST   D19S433: 13,15
ST   D21S11: 28,29
ST   D2S1338: 17,24
ST   D3S1358: 15,17
ST   D5S818: 10,12
ST   D7S820: 10,11
ST   D8S1179: 10,12
ST   FGA: 22
ST   TH01: 7,9.3
ST   TPOX: 8
ST   vWA: 16,17
OX   NCBI_TaxID=9606; ! Homo sapiens (Human)
SX   Male
AG   Blastocyst stage
CA   Embryonic stem cell
DT   Created: 06-06-12; Last updated: 29-06-23; Version: 20
//
RX   PubMed=12968106; DOI=10.1634/stemcells.21-5-521;
RA   Mitalipova M., Calhoun J., Shin S., Wininger D., Schulz T., Noggle S.A.,
RA   Venable A., Lyons I.G., Robins A., Stice S.L.;
RT   "Human embryonic stem cell lines derived from discarded embryos.";
RL   Stem Cells 21:521-526(2003).
//
RX   PubMed=15153607; DOI=10.1634/stemcells.22-3-292;
RA   Zeng X.-M., Miura T., Luo Y.-Q., Bhattacharya B., Condie B., Chen J.,
RA   Ginis I., Lyons I.G., Mejido J., Puri R.K., Rao M.S., Freed W.J.;
RT   "Properties of pluripotent human embryonic stem cells BG01 and BG02.";
RL   Stem Cells 22:292-312(2004).
//
RX   PubMed=15684826; DOI=10.1089/scd.2004.13.585;
RA   Brimble S.N., Zeng X.-M., Weiler D.A., Luo Y.-Q., Liu Y., Lyons I.G.,
RA   Freed W.J., Robins A.J., Rao M.S., Schulz T.C.;
RT   "Karyotypic stability, genotyping, differentiation, feeder-free
RT   maintenance, and gene expression sampling in three human embryonic
RT   stem cell lines derived prior to August 9, 2001.";
RL   Stem Cells Dev. 13:585-597(2004).
//
RX   PubMed=16919167; DOI=10.1186/1741-7007-4-28;
RA   Josephson R., Sykes G.R., Liu Y., Ording C.J., Xu W.-N., Zeng X.-M.,
RA   Shin S., Loring J.F., Maitra A., Rao M.S., Auerbach J.M.;
RT   "A molecular scheme for improved characterization of human embryonic
RT   stem cell lines.";
RL   BMC Biol. 4:28.1-28.13(2006).
//
RX   PubMed=17570852; DOI=10.1186/gb-2007-8-6-r113;
RA   Hirst M., Delaney A., Rogers S.A., Schnerch A., Persaud D.R.,
RA   O'Connor M.D., Zeng T., Moksa M., Fichter K., Mah D., Go A.,
RA   Morin R.D., Baross A., Zhao Y.-J., Khattra J., Prabhu A.-L., Pandoh P.,
RA   McDonald H., Asano J.K., Dhalla N., Ma K., Lee S., Ally A., Chahal N.,
RA   Menzies S., Siddiqui A., Holt R.A., Jones S.J.M., Gerhard D.S.,
RA   Thomson J.A., Eaves C.J., Marra M.A.;
RT   "LongSAGE profiling of nine human embryonic stem cell lines.";
RL   Genome Biol. 8:R113.1-R113.12(2007).
//
RX   PubMed=17572666; DOI=10.1038/nbt1318;
RA   Adewumi O., Aflatoonian B., Ahrlund-Richter L., Amit M., Andrews P.W.,
RA   Beighton G., Bello P.A., Benvenisty N., Berry L.S., Bevan S., Blum B.,
RA   Brooking J., Chen K.G., Choo A.B.-H., Churchill G.A., Corbel M.,
RA   Damjanov I., Draper J.S., Dvorak P., Emanuelsson K., Fleck R.A.,
RA   Ford A., Gertow K., Gertsenstein M., Gokhale P.J., Hamilton R.S.,
RA   Hampl A., Healy L.E., Hovatta O., Hyllner J., Imreh M.P.,
RA   Itskovitz-Eldor J., Jackson J., Johnson J.L., Jones M., Kee K.,
RA   King B.L., Knowles B.B., Lako M., Lebrin F., Mallon B.S., Manning D.,
RA   Mayshar Y., McKay R.D.G., Michalska A.E., Mikkola M., Mileikovsky M.,
RA   Minger S.L., Moore H.D., Mummery C.L., Nagy A., Nakatsuji N.,
RA   O'Brien C.M., Oh S.K.-W., Olsson C., Otonkoski T., Park K.-Y.,
RA   Passier R., Patel H., Patel M.J., Pedersen R., Pera M.F.,
RA   Piekarczyk M.S., Reijo Pera R.A., Reubinoff B.E., Robins A.J.,
RA   Rossant J., Rugg-Gunn P., Schulz T.C., Semb H., Sherrer E.S., Siemen H.,
RA   Stacey G.N., Stojkovic M., Suemori H., Szatkiewicz J., Turetsky T.T.,
RA   Tuuri T., van den Brink S., Vintersten K., Vuoristo S.,
RA   Ward-van Oostwaard D., Weaver T.A., Young L.A., Zhang W.-D.;
RT   "Characterization of human embryonic stem cell lines by the
RT   International Stem Cell Initiative.";
RL   Nat. Biotechnol. 25:803-816(2007).
//
RX   PubMed=18772870; DOI=10.1038/nprot.2008.140;
RA   Braam S.R., Denning C., Matsa E., Young L.E., Passier R.,
RA   Mummery C.L.;
RT   "Feeder-free culture of human embryonic stem cells in conditioned
RT   medium for efficient genetic modification.";
RL   Nat. Protoc. 3:1435-1443(2008).
//
RX   PubMed=23117585; DOI=10.1016/j.scr.2012.09.002;
RA   Mallon B.S., Chenoweth J.G., Johnson K.R., Hamilton R.S., Tesar P.J.,
RA   Yavatkar A.S., Tyson L.J., Park K., Chen K.G., Fann Y.C., McKay R.D.G.;
RT   "StemCellDB: the human pluripotent stem cell database at the National
RT   Institutes of Health.";
RL   Stem Cell Res. 10:57-66(2013).
//
RX   PubMed=24172903; DOI=10.1038/nature12745;
RA   Gafni O., Weinberger L., Mansour A.A., Manor Y.S., Chomsky E.,
RA   Ben-Yosef D., Kalma Y., Viukov S., Maza I., Zviran A., Rais Y.,
RA   Shipony Z., Mukamel Z., Krupalnik V., Zerbib M., Geula S., Caspi I.,
RA   Schneir D., Shwartz T., Gilad S., Amann-Zalcenstein D., Benjamin S.,
RA   Amit I., Tanay A., Massarwa R., Novershtern N., Hanna J.H.;
RT   "Derivation of novel human ground state naive pluripotent stem
RT   cells.";
RL   Nature 504:282-286(2013).
//