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Cellosaurus BG02 (CVCL_9729)

[Text version]
Cell line name BG02
Synonyms BG02ES; hESBGN-02; HESBGN-02; BGN-02; VIACe002-A; BresaGen 02
Accession CVCL_9729
Resource Identification Initiative To cite this cell line use: BG02 (RRID:CVCL_9729)
Comments Part of: ENCODE project common cell types; tier 3.
From: ViaCyte, Inc. (originally from BresaGen); San Diego; USA.
Omics: Transcriptome analysis by massively parallel signature sequencing (MPSS).
Omics: Transcriptome analysis by microarray.
Derived from site: In situ; Blastocyst; UBERON=UBERON_0000358.
Cell type: Embryonic stem cell; CL=CL_0002322.
HLA typing Source: PubMed=16919167
Class I
HLA-AA*24,68
HLA-BB*35:11,35
HLA-CC*03,04
Class II
HLA-DQDQB1*03,06:01
HLA-DRDRB1*15,16:02
DRB5*01

Source: PubMed=15684826
Class I
HLA-AA*24:02,68:01
HLA-BB*35:03:35:11
HLA-CC*03:04,04:01
Class II
HLA-DQDQB1*03:01,06:01
HLA-DRDRB1*15:02,16:02
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling Blastocyst stage
Category Embryonic stem cell
STR profile Source(s): PubMed=15684826; PubMed=16919167; WiCell

Markers:
AmelogeninX,Y
CSF1PO8,10
D2S133817,24
D3S135815,17
D5S81811,12
D7S82012,14
D8S117913,14
D13S31711
D16S53912
D18S5114,16
D19S43313,14.2
D21S1127,30
FGA20,25
TH018,9
TPOX11
vWA18,19

Run an STR similarity search on this cell line
Web pages http://genome.ucsc.edu/ENCODE/protocols/cell/human/BG02ES_and_H9ES_Myers_protocols.pdf
http://stemcells.nih.gov/staticresources/research/protocols/BresaGen_hESC_manual_2.1.pdf
https://stemcelldb.nih.gov/cellLineDetails.do?id=11
Publications

PubMed=12968106; DOI=10.1634/stemcells.21-5-521
Mitalipova M., Calhoun J., Shin S., Wininger D., Schulz T., Noggle S.A., Venable A., Lyons I.G., Robins A., Stice S.L.
Human embryonic stem cell lines derived from discarded embryos.
Stem Cells 21:521-526(2003)

PubMed=15153607; DOI=10.1634/stemcells.22-3-292
Zeng X.-M., Miura T., Luo Y.-Q., Bhattacharya B., Condie B., Chen J., Ginis I., Lyons I.G., Mejido J., Puri R.K., Rao M.S., Freed W.J.
Properties of pluripotent human embryonic stem cells BG01 and BG02.
Stem Cells 22:292-312(2004)

PubMed=15684826; DOI=10.1089/scd.2004.13.585
Brimble S.N., Zeng X.-M., Weiler D.A., Luo Y.-Q., Liu Y., Lyons I.G., Freed W.J., Robins A.J., Rao M.S., Schulz T.C.
Karyotypic stability, genotyping, differentiation, feeder-free maintenance, and gene expression sampling in three human embryonic stem cell lines derived prior to August 9, 2001.
Stem Cells Dev. 13:585-597(2004)

PubMed=16919167; DOI=10.1186/1741-7007-4-28
Josephson R., Sykes G.R., Liu Y., Ording C.J., Xu W.-N., Zeng X.-M., Shin S., Loring J.F., Maitra A., Rao M.S., Auerbach J.M.
A molecular scheme for improved characterization of human embryonic stem cell lines.
BMC Biol. 4:28.1-28.13(2006)

PubMed=17572666; DOI=10.1038/nbt1318
Adewumi O., Aflatoonian B., Ahrlund-Richter L., Amit M., Andrews P.W., Beighton G., Bello P.A., Benvenisty N., Berry L.S., Bevan S., Blum B., Brooking J., Chen K.G., Choo A.B.-H., Churchill G.A., Corbel M., Damjanov I., Draper J.S., Dvorak P., Emanuelsson K., Fleck R.A., Ford A., Gertow K., Gertsenstein M., Gokhale P.J., Hamilton R.S., Hampl A., Healy L.E., Hovatta O., Hyllner J., Imreh M.P., Itskovitz-Eldor J., Jackson J., Johnson J.L., Jones M., Kee K., King B.L., Knowles B.B., Lako M., Lebrin F., Mallon B.S., Manning D., Mayshar Y., McKay R.D.G., Michalska A.E., Mikkola M., Mileikovsky M., Minger S.L., Moore H.D., Mummery C.L., Nagy A., Nakatsuji N., O'Brien C.M., Oh S.K.-W., Olsson C., Otonkoski T., Park K.-Y., Passier R., Patel H., Patel M.J., Pedersen R., Pera M.F., Piekarczyk M.S., Reijo Pera R.A., Reubinoff B.E., Robins A.J., Rossant J., Rugg-Gunn P., Schulz T.C., Semb H., Sherrer E.S., Siemen H., Stacey G.N., Stojkovic M., Suemori H., Szatkiewicz J., Turetsky T.T., Tuuri T., van den Brink S., Vintersten K., Vuoristo S., Ward-van Oostwaard D., Weaver T.A., Young L.A., Zhang W.-D.
Characterization of human embryonic stem cell lines by the International Stem Cell Initiative.
Nat. Biotechnol. 25:803-816(2007)

PubMed=23117585; DOI=10.1016/j.scr.2012.09.002
Mallon B.S., Chenoweth J.G., Johnson K.R., Hamilton R.S., Tesar P.J., Yavatkar A.S., Tyson L.J., Park K., Chen K.G., Fann Y.C., McKay R.D.G.
StemCellDB: the human pluripotent stem cell database at the National Institutes of Health.
Stem Cell Res. 10:57-66(2013)

Cross-references
Cell line collections (Providers) WiCell; bg02
Cell line databases/resources hPSCreg; VIACe002-A
ISCR; 64
SKIP; SKIP001939
Biological sample resources BioSample; SAMN03471900
ENCODE; ENCBS274AAA
ENCODE; ENCBS275AAA
ENCODE; ENCBS276AAA
ENCODE; ENCBS277AAA
ENCODE; ENCBS278AAA
ENCODE; ENCBS279AAA
ENCODE; ENCBS280AAA
ENCODE; ENCBS281AAA
Encyclopedic resources Wikidata; Q54796222
Experimental variables resources EFO; EFO_0002778
Gene expression databases GEO; GSM472944
GEO; GSM500933
GEO; GSM500934
GEO; GSM856720
GEO; GSM862731
GEO; GSM923453
Entry history
Entry creation06-Jun-2012
Last entry update29-Jun-2023
Version number21