Cellosaurus logo
expasy logo

Cellosaurus UCSF4 (CVCL_A022)

[Text version]
Cell line name UCSF4
Synonyms UCSF-4
Accession CVCL_A022
Resource Identification Initiative To cite this cell line use: UCSF4 (RRID:CVCL_A022)
Comments From: University of California, San Francisco; San Francisco; USA.
Registration: NIH Human Embryonic Stem Cell Registry; NIHhESC-10-0044.
Omics: Deep exome analysis.
Omics: DNA methylation analysis.
Omics: Genome sequenced.
Omics: H3K27me3 ChIP-seq epigenome analysis.
Omics: H3K36me3 ChIP-seq epigenome analysis.
Omics: H3K4me1 ChIP-seq epigenome analysis.
Omics: H3K4me3 ChIP-seq epigenome analysis.
Omics: H3K9me3 ChIP-seq epigenome analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Blastocyst; UBERON=UBERON_0000358.
Cell type: Embryonic stem cell; CL=CL_0002322.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling Blastocyst stage
Category Embryonic stem cell
Publications

PubMed=28445466; DOI=10.1038/nature22312
Merkle F.T., Ghosh S., Kamitaki N., Mitchell J., Avior Y., Mello C., Kashin S., Mekhoubad S., Ilic D., Charlton M., Saphier G., Handsaker R.E., Genovese G., Bar S., Benvenisty N., McCarroll S.A., Eggan K.C.
Human pluripotent stem cells recurrently acquire and expand dominant negative P53 mutations.
Nature 545:229-233(2017)

Cross-references
Cell line databases/resources ISCR; 875
NIHhESC; NIHhESC-10-0044
Biological sample resources ENCODE; ENCBS274MNP
ENCODE; ENCBS281XEU
ENCODE; ENCBS296VOU
ENCODE; ENCBS311CPE
ENCODE; ENCBS488VWE
ENCODE; ENCBS496TQG
ENCODE; ENCBS497PCQ
ENCODE; ENCBS838AWQ
Encyclopedic resources Wikidata; Q54990054
Experimental variables resources EFO; EFO_0007116
Gene expression databases GEO; GSM941748
GEO; GSM941749
GEO; GSM941750
GEO; GSM941751
GEO; GSM941752
GEO; GSM941753
GEO; GSM958175
GEO; GSM958179
GEO; GSM1127063
GEO; GSM1127070
GEO; GSM1127080
GEO; GSM1127081
GEO; GSM1127084
GEO; GSM1127090
GEO; GSM1127109
GEO; GSM1127112
GEO; GSM1127122
GEO; GSM1127123
GEO; GSM1582485
Entry history
Entry creation06-Jun-2012
Last entry update29-Jun-2023
Version number15