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Cellosaurus Ma-Mel-08a (CVCL_A121)

[Text version]
Cell line name Ma-Mel-08a
Synonyms Ma-Mel-8a; MaMel-08a; MaMel08a
Accession CVCL_A121
Resource Identification Initiative To cite this cell line use: Ma-Mel-08a (RRID:CVCL_A121)
Comments Omics: SNP array analysis.
Derived from site: Metastatic; Hypodermis; UBERON=UBERON_0002072.
Derived from site: Metastatic; Skin; UBERON=UBERON_0002097.
Sequence variations
  • Gene deletion; HGNC; 1787; CDKN2A; Zygosity=Homozygous (PubMed=26909863).
  • Gene deletion; HGNC; 1788; CDKN2B; Zygosity=Homozygous (PubMed=26909863).
  • Gene fusion; HGNC; 7413; MTAP + HGNC; 34341; CDKN2B-AS1; Name(s)=MTAP-ANRIL (PubMed=26909863).
  • Mutation; HGNC; 9588; PTEN; Simple; p.Glu157Ter (c.469G>T); ClinVar=VCV000007814; Zygosity=Unspecified (PubMed=23851445).
  • Mutation; HGNC; 9588; PTEN; Simple; p.Asp162Val (c.485A>T); Zygosity=Unspecified (PubMed=23851445).
  • Mutation; HGNC; 11730; TERT; Simple; c.1-146C>T (c.250C>T) (C250T); Zygosity=Unspecified; Note=In promoter (PubMed=23348503).
  • Mutation; HGNC; 11998; TP53; Simple; p.Arg283Cys (c.847C>T); ClinVar=VCV000127824; Zygosity=Unspecified (PubMed=23851445).
Disease Cutaneous nodular melanoma (NCIt: C4225)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_A122 ! Ma-Mel-08b
Sex of cell Male
Age at sampling 56Y
Category Cancer cell line
STR profile Source(s): ECACC=13012434; ESTDAB=ESTDAB-105

Markers:
AmelogeninX,Y
CSF1PO11,12
D3S135814,15
D5S81812,13
D7S82010
D13S31712
D16S5399,13
FGA21
TH019.3
TPOX8
vWA18

Run an STR similarity search on this cell line
Publications

PubMed=17311103; DOI=10.1371/journal.pone.0000236
Ugurel S., Thirumaran R.K., Bloethner S., Gast A., Sucker A., Mueller-Berghaus J., Rittgen W., Hemminki K., Becker J.C., Kumar R., Schadendorf D.
B-RAF and N-RAS mutations are preserved during short time in vitro propagation and differentially impact prognosis.
PLoS ONE 2:E236-E236(2007)

PubMed=20544847; DOI=10.1002/gcc.20785
Gast A., Scherer D., Chen B.-W., Bloethner S., Melchert S., Sucker A., Hemminki K., Schadendorf D., Kumar R.
Somatic alterations in the melanoma genome: a high-resolution array-based comparative genomic hybridization study.
Genes Chromosomes Cancer 49:733-745(2010)

PubMed=23348503; DOI=10.1126/science.1230062
Horn S., Figl A., Rachakonda P.S., Fischer C., Sucker A., Gast A., Kadel S., Moll I., Nagore E., Hemminki K., Schadendorf D., Kumar R.
TERT promoter mutations in familial and sporadic melanoma.
Science 339:959-961(2013)

PubMed=23851445; DOI=10.1158/1541-7786.MCR-13-0006
Dahl C., Christensen C., Jonsson G., Lorentzen A., Skjodt M.L., Borg A., Pawelec G., Guldberg P.
Mutual exclusivity analysis of genetic and epigenetic drivers in melanoma identifies a link between p14 ARF and RARbeta signaling.
Mol. Cancer Res. 11:1166-1178(2013)

PubMed=26909863; DOI=10.18632/oncotarget.7503
Xie H.-P., Rachakonda P.S., Heidenreich B., Nagore E., Sucker A., Hemminki K., Schadendorf D., Kumar R.
Mapping of deletion breakpoints at the CDKN2A locus in melanoma: detection of MTAP-ANRIL fusion transcripts.
Oncotarget 7:16490-16504(2016)

Cross-references
Cell line collections (Providers) ECACC; 13012434
Cell line databases/resources cancercelllines; CVCL_A121
ESTDAB; ESTDAB-105
Encyclopedic resources Wikidata; Q54903730
Gene expression databases GEO; GSM436989
Polymorphism and mutation databases Cosmic; 1467738
Cosmic; 1846566
Cosmic; 2163818
Cosmic; 2686330
Progenetix; CVCL_A121
Entry history
Entry creation06-Jun-2012
Last entry update02-May-2024
Version number20