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Cellosaurus HPSI1013i-cups_3 (CVCL_AH60)

[Text version]

Cell line name HPSI1013i-cups_3
Synonyms WTSIi082-A
Accession CVCL_AH60
Resource Identification Initiative To cite this cell line use: HPSI1013i-cups_3 (RRID:CVCL_AH60)
Comments From: Cambridge BioResource; Cambridge; UK.
From: Wellcome Trust Sanger Institute; Hinxton; UK.
Omics: Cellular phenotyping.
Omics: Deep exome analysis.
Omics: Deep RNAseq analysis.
Omics: DNA methylation analysis.
Omics: Genome sequenced.
Omics: Transcriptome analysis.
Derived from sampling site: Skin.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_JP96 ! HPSI1013i-cups_1
CVCL_JP97 ! HPSI1013i-cups_2
Sex of cell Female
Age at sampling 45-49Y
Category Induced pluripotent stem cell
Publications

PubMed=28489815; DOI=10.1038/nature22403
Kilpinen H., Goncalves A., Leha A., Afzal V., Alasoo K., Ashford S., Bala S., Bensaddek D., Casale F.P., Culley O.J., Danecek P., Faulconbridge A., Harrison P.W., Kathuria A., McCarthy D., McCarthy S.A., Meleckyte R., Memari Y., Moens N., Soares F., Mann A., Streeter I., Agu C.A., Alderton A., Nelson R., Harper S., Patel M., White A., Patel S.R., Clarke L., Halai R., Kirton C.M., Kolb-Kokocinski A., Beales P., Birney E., Danovi D., Lamond A.I., Ouwehand W.H., Vallier L., Watt F.M., Durbin R., Stegle O., Gaffney D.J.
Common genetic variation drives molecular heterogeneity in human iPSCs.
Nature 546:370-375(2017)

PubMed=30784590; DOI=10.1016/j.celrep.2019.01.094
Vigilante A., Laddach A., Moens N., Meleckyte R., Leha A., Ghahramani A., Culley O.J., Kathuria A., Hurling C., Vickers A., Wiseman E., Tewary M., Zandstra P.W., Durbin R., Fraternali F., Stegle O., Birney E., Luscombe N.M., Danovi D., Watt F.M.
Identifying extrinsic versus intrinsic drivers of variation in cell behavior in human iPSC lines from healthy donors.
Cell Rep. 26:2078-2087.e3(2019)

Cross-references
Cell line collections ECACC; 77650031
Cell line databases/resources HipSci; HPSI1013i-cups_3
hPSCreg; WTSIi082-A
SKIP; SKIP002700
Biological sample resources BioSamples; SAMEA2498700
Gene expression databases ArrayExpress; E-MTAB-4057
Other Wikidata; Q54891541
Entry history
Entry creation23-Feb-2016
Last entry update12-Mar-2020
Version number11