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Cellosaurus HT1080 EGFP (CVCL_C0RF)

[Text version]
Cell line name HT1080 EGFP
Synonyms HT1080_EGFP
Accession CVCL_C0RF
Resource Identification Initiative To cite this cell line use: HT1080 EGFP (RRID:CVCL_C0RF)
Comments Population: Caucasian.
Transfected with: UniProtKB; P42212; GFP (with p.Phe64Leu, p.Ser65Thr and p.His231Leu = EGFP).
Transfected with: UniProtKB; P00552; Transposon Tn5 neo.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Bone, pelvis, acetabulum; UBERON=UBERON_0001269.
Sequence variations
  • Gene deletion; HGNC; 1787; CDKN2A; Zygosity=Homozygous (from parent cell line).
  • Mutation; HGNC; 5382; IDH1; Simple; p.Arg132Cys (c.394C>T); ClinVar=VCV000375891; Zygosity=Heterozygous (from parent cell line).
  • Mutation; HGNC; 7989; NRAS; Simple; p.Gln61Lys (c.181C>A); ClinVar=VCV000073058; Zygosity=Heterozygous (from parent cell line).
Disease Fibrosarcoma (NCIt: C3043)
Fibrosarcoma (ORDO: Orphanet_2030)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_0317 (HT-1080)
Sex of cell Male
Age at sampling 35Y
Category Cancer cell line
Publications

PubMed=30962207; DOI=10.15252/embr.201845766
Linden M., Thomsen C., Grundevik P., Jonasson E., Andersson D., Runnberg R., Dolatabadi S., Vannas C., Santamaria M.L., Fagman H., Stahlberg A., Aman P.
FET family fusion oncoproteins target the SWI/SNF chromatin remodeling complex.
EMBO Rep. 20:e45766.1-e45766.15(2019)

Cross-references
Cell line databases/resources cancercelllines; CVCL_C0RF
Encyclopedic resources Wikidata; Q112929755
Gene expression databases GEO; GSM3585515
GEO; GSM3585516
GEO; GSM3585517
GEO; GSM3585518
Entry history
Entry creation23-Jun-2022
Last entry update05-Oct-2023
Version number6