Cellosaurus SK-N-SH-RA (CVCL_D044)

Cell line name SK-N-SH-RA
Synonyms SK-N-SH_RA; SK-N-SH Retinoic acid
Accession CVCL_D044
Resource Identification Initiative To cite this cell line use: SK-N-SH-RA (RRID:CVCL_D044)
Comments Part of: ENCODE project common cell types; tier 3.
Sequence variation: ALK p.Phe1174Leu (from parent cell line).
Omics: DNA methylation analysis.
Omics: H3K27me3 ChIP-seq epigenome analysis.
Omics: H3K36me3 ChIP-seq epigenome analysis.
Omics: H3K4me3 ChIP-seq epigenome analysis.
Disease Neuroblastoma (NCIt: C3270)
Derived from metastatic site: Bone marrow.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_0531 (SK-N-SH)
Sex of cell Female
Category Cancer cell line
Publications

PubMed=23325432; DOI=10.1101/gr.147942.112
Varley K.E., Gertz J., Bowling K.M., Parker S.L., Reddy T.E., Pauli-Behn F., Cross M.K., Williams B.A., Stamatoyannopoulos J.A., Crawford G.E., Absher D.M., Wold B.J., Myers R.M.
Dynamic DNA methylation across diverse human cell lines and tissues.
Genome Res. 23:555-567(2013)

Cross-references
Ontologies CLO; CLO_0037234
EFO; EFO_0002802
Biological sample resources ENCODE; ENCBS172JMM
ENCODE; ENCBS366ENC
ENCODE; ENCBS367ENC
ENCODE; ENCBS404ENC
ENCODE; ENCBS606NNZ
ENCODE; ENCBS718MJZ
ENCODE; ENCBS767VYD
ENCODE; ENCBS799ICU
Gene expression databases GEO; GSM472912
GEO; GSM472913
GEO; GSM472917
GEO; GSM945202
GEO; GSM945209
GEO; GSM945210
GEO; GSM945317