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Cellosaurus AG04450 (CVCL_F486)

[Text version]
Cell line name AG04450
Accession CVCL_F486
Resource Identification Initiative To cite this cell line use: AG04450 (RRID:CVCL_F486)
Comments Part of: ENCODE project common cell types; tier 3.
Omics: CTCF ChIP-seq epigenome analysis.
Omics: H3K27ac ChIP-seq epigenome analysis.
Omics: H3K27me3 ChIP-seq epigenome analysis.
Omics: H3K4me3 ChIP-seq epigenome analysis.
Omics: H3K9me3 ChIP-seq epigenome analysis.
Omics: DNA methylation analysis.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Fetal lung; UBERON=UBERON_0005597.
Cell type: Fibroblast of lung; CL=CL_0002553.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_F485 ! AG04449
Sex of cell Male
Age at sampling 12FW
Category Finite cell line
Web pages http://genome.ucsc.edu/ENCODE/protocols/cell/human/AG04450_Stam_protocol.pdf
Publications

CLPUB00597
National Institute on Aging
1994 catalog of cell lines. NIA Aging Cell Repository.
(In) Institute for Medical Research (Camden, N.J.); pp.1-351; National Institutes of Health; Bethesda (1994)

PubMed=12297622; DOI=10.1073/pnas.162488599
Chang H.Y.-H., Chi J.-T., Dudoit S., Bondre C., van de Rijn M., Botstein D., Brown P.O.
Diversity, topographic differentiation, and positional memory in human fibroblasts.
Proc. Natl. Acad. Sci. U.S.A. 99:12877-12882(2002)

PubMed=23325432; DOI=10.1101/gr.147942.112
Varley K.E., Gertz J., Bowling K.M., Parker S.L., Reddy T.E., Pauli-Behn F., Cross M.K., Williams B.A., Stamatoyannopoulos J.A., Crawford G.E., Absher D.M., Wold B.J., Myers R.M.
Dynamic DNA methylation across diverse human cell lines and tissues.
Genome Res. 23:555-567(2013)

Cross-references
Cell line collections (Providers) Coriell; AG04450
Cell line databases/resources CLO; CLO_0034832
Biological sample resources ENCODE; ENCBS004ENC
ENCODE; ENCBS008ENC
ENCODE; ENCBS485QDY
ENCODE; ENCBS554API
Encyclopedic resources Wikidata; Q54610242
Experimental variables resources EFO; EFO_0006270
Gene expression databases GEO; GSM510532
GEO; GSM510534
GEO; GSM749697
GEO; GSM749769
GEO; GSM945169
GEO; GSM945177
GEO; GSM1010912
GEO; GSM1010913
GEO; GSM1010914
GEO; GSM1022635
GEO; GSM2072418
GEO; GSM2072419
GEO; GSM2072446
GEO; GSM2072447
Entry history
Entry creation11-Feb-2013
Last entry update29-Jun-2023
Version number18