Home  |  Contact

Cellosaurus RKO BRAF(V600E/-/-) (CVCL_HE17)

[Text version]

Cell line name RKO BRAF(V600E/-/-)
Synonyms BRAF (V600E/-/-) RKO
Accession CVCL_HE17
Resource Identification Initiative To cite this cell line use: RKO BRAF(V600E/-/-) (RRID:CVCL_HE17)
Comments Characteristics: RKO carries a stable triplication of the BRAF gene with one wild-type (V-600) and two mutant alleles (E-600). This KO cell line carries only the mutant allele.
Knockout cell: Method=Homologous recombination (2 of 3 alleles); HGNC; 1097; BRAF.
Sequence variations Homozygous for BRAF p.Val600Glu (c.1799T>A) (ClinVar=VCV000013961).
Heterozygous for ACVR2A p.Lys437fs*19 (c.1309_1310delAA) and p.Lys437fs*5 (c.1310delA) (from parent cell line).
PIK3CA p.His1047Arg (c.3140A>G) (ClinVar=VCV000013652) (from parent cell line).
Heterozygous for TGFBR2 p.Lys128Serfs*35 (c.383delA) and p.Leu452Pro (c.1355T>C) (from parent cell line).
Disease Colon carcinoma (NCIt: C4910)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_0504 (RKO)
Sex of cell Sex unspecified
Age at sampling Age unspecified
Category Cancer cell line
Web pages https://www.horizondiscovery.com/human-braf-v600e-rko-cell-line-hd-106-004

PubMed=19661383; DOI=10.1126/science.1174229
Yun J., Rago C., Cheong I., Pagliarini R., Angenendt P., Rajagopalan H., Schmidt K., Willson J.K.V., Markowitz S.D., Zhou S., Diaz L.A. Jr., Velculescu V.E., Lengauer C., Kinzler K.W., Vogelstein B., Papadopoulos N.
Glucose deprivation contributes to the development of KRAS pathway mutations in tumor cells.
Science 325:1555-1559(2009)

Other Wikidata; Q54950541
Entry history
Entry creation01-Dec-2016
Last entry update02-Jul-2020
Version number6