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Cellosaurus SU-DIPG-VI (CVCL_IT40)

Cell line name SU-DIPG-VI
Synonyms SU-DIPGVI; SUDIPGVI; SU-DIPG-6; DIPG 6; DIPG-6; DIPG6; SJHGG042550
Accession CVCL_IT40
Secondary accession CVCL_IP15
Resource Identification Initiative To cite this cell line use: SU-DIPG-VI (RRID:CVCL_IT40)
Comments Doubling time: 5.8 days (PubMed=34215733).
Omics: Transcriptome analysis by RNAseq.
Donor information: Established from a sample taken just after the death at age 7 of McKenna Wetzel. When McKenna died, the Wetzels donated to researchers at Stanford University the tissues that allowed this cell line to be derived. They also created the McKenna Claire Foundation's whose mission is to help cure pediatric brain cancer by raising awareness, increasing community involvement and funding research.
Derived from site: In situ; Brainstem, pons; UBERON=UBERON_0000988.
Sequence variations
Disease Diffuse intrinsic pontine glioma (NCIt: C94764)
Diffuse intrinsic pontine glioma (ORDO: Orphanet_497188)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling 7Y
Category Cancer cell line
STR profile Source(s): PubMed=25939062; PubMed=28823557; PubMed=34732238

Markers:
AmelogeninX
CSF1PO9,10 (PubMed=28823557)
10,11 (PubMed=25939062; PubMed=34732238)
D5S81810,12
D7S8208,9
D13S31711
D16S5398,13 (PubMed=25939062; PubMed=28823557)
13 (PubMed=34732238)
D21S1129,30,31 (PubMed=34732238)
29,31 (PubMed=25939062; PubMed=28823557)
TH017,8
TPOX8,11
vWA17,18 (PubMed=25939062; PubMed=28823557)
18 (PubMed=34732238)

Run an STR similarity search on this cell line
Web pages http://mckennaclairefoundation.org/
Publications

PubMed=24777482; DOI=10.1007/s00401-014-1272-4
Caretti V., Sewing A.C.P., Lagerweij T., Schellen P., Bugiani M., Jansen M.H.A., van Vuurden D.G., Navis A.C., Horsman I., Vandertop W.P., Noske D.P., Wesseling P., Kaspers G.J.L., Nazarian J., Vogel H., Hulleman E., Monje M., Wurdinger T.
Human pontine glioma cells can induce murine tumors.
Acta Neuropathol. 127:897-909(2014)

PubMed=25366336; DOI=10.1093/neuonc/nou303
Green A.L., Ramkissoon S.H., McCauley D., Jones K., Perry J.A., Hsu J.H.-R., Ramkissoon L.A., Maire C.L., Hubbell-Engler B., Knoff D.S., Shacham S., Ligon K.L., Kung A.L.-J.
Preclinical antitumor efficacy of selective exportin 1 inhibitors in glioblastoma.
Neuro-oncol. 17:697-707(2015)

PubMed=25939062; DOI=10.1038/nm.3855
Grasso C.S., Tang Y.-J., Truffaux N., Berlow N.E., Liu L.-N., Debily M.-A., Quist M.J., Davis L.E., Huang E.C., Woo P.J., Ponnuswami A., Chen S., Johung T.B., Sun W.-C., Kogiso M., Du Y.-C., Qi L., Huang Y.-L., Hutt-Cabezas M., Warren K.E., Le Dret L., Meltzer P.S., Mao H., Quezado M., van Vuurden D.G., Abraham J., Fouladi M., Svalina M.N., Wang N., Hawkins C., Nazarian J., Alonso M.M., Raabe E.H., Hulleman E., Spellman P.T., Li X.-N., Keller C., Pal R., Grill J., Monje M.
Functionally defined therapeutic targets in diffuse intrinsic pontine glioma.
Nat. Med. 21:555-559(2015)

PubMed=28823557; DOI=10.1016/j.cell.2017.07.016
Qin E.Y., Cooper D.D., Abbott K.L., Lennon J., Nagaraja S., Mackay A., Jones C., Vogel H., Jackson P.K., Monje M.
Neural precursor-derived pleiotrophin mediates subventricular zone invasion by glioma.
Cell 170:845-859.e19(2017)

PubMed=33319914; DOI=10.1093/gigascience/giaa136
Sanders L.M., Cheney A., Seninge L., van den Bout A., Chen M., Beale H.C., Kephart E.T., Pfeil J., Learned K., Lyle A.G., Bjork I., Haussler D., Salama S.R., Vaske O.M.
Identification of a differentiation stall in epithelial mesenchymal transition in histone H3-mutant diffuse midline glioma.
GigaScience 9:giaa136.1-giaa136.14(2020)

PubMed=34215733; DOI=10.1038/s41467-021-24168-8
He C., Xu K., Zhu X.-Y., Dunphy P.S., Gudenas B., Lin W.-W., Twarog N., Hover L.D., Kwon C.-H., Kasper L.H., Zhang J.-Y., Li X.-Y., Dalton J., Jonchere B., Mercer K.S., Currier D.G., Caufield W., Wang Y.-Z., Xie J., Broniscer A., Wetmore C., Upadhyaya S.A., Qaddoumi I., Klimo P., Boop F., Gajjar A., Zhang J.-H., Orr B.A., Robinson G.W., Monje M., Freeman B.B. III, Roussel M.F., Northcott P.A., Chen T.-S., Rankovic Z., Wu G., Chiang J., Tinkle C.L., Shelat A.A., Baker S.J.
Patient-derived models recapitulate heterogeneity of molecular signatures and drug response in pediatric high-grade glioma.
Nat. Commun. 12:4089.1-4089.17(2021)

PubMed=34732238; DOI=10.1186/s40478-021-01270-y
Xu C., Liu H., Pirozzi C.J., Chen L.H., Greer P.K., Diplas B.H., Zhang L.-W., Waitkus M.S., He Y.-P., Yan H.
TP53 wild-type/PPM1D mutant diffuse intrinsic pontine gliomas are sensitive to a MDM2 antagonist.
Acta Neuropathol. Commun. 9:178.1-178.12(2021)

Cross-references
Cell line databases/resources cancercelllines; CVCL_IT40
Anatomy/cell type resources BTO; BTO:0005954
Encyclopedic resources Wikidata; Q54970735
Entry history
Entry creation03-Mar-2017
Last entry update05-Oct-2023
Version number13