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Cellosaurus AG09319 (CVCL_L243)

Cell line name AG09319
Accession CVCL_L243
Resource Identification Initiative To cite this cell line use: AG09319 (RRID:CVCL_L243)
Comments Part of: ENCODE project common cell types; tier 3.
Omics: CTCF ChIP-seq epigenome analysis.
Omics: H3K4me3 ChIP-seq epigenome analysis.
Omics: DNA methylation analysis.
Omics: Transcriptome analysis by microarray.
Derived from site: In situ; Oral cavity, gingiva; UBERON=UBERON_0001828.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_YL21 (WT-AG09319 C1)CVCL_ZM11 (WT-AG09319 C2)
Sex of cell Female
Age at sampling 24Y
Category Finite cell line
Web pages http://genome.ucsc.edu/ENCODE/protocols/cell/human/AG09319_Stam_protocol.pdf
Publications

CLPUB00597
National Institute on Aging
1994 catalog of cell lines. NIA Aging Cell Repository.
(In) Institute for Medical Research (Camden, N.J.); pp.1-351; National Institutes of Health; Bethesda (1994)

PubMed=12297622; DOI=10.1073/pnas.162488599
Chang H.Y.-H., Chi J.-T., Dudoit S., Bondre C., van de Rijn M., Botstein D., Brown P.O.
Diversity, topographic differentiation, and positional memory in human fibroblasts.
Proc. Natl. Acad. Sci. U.S.A. 99:12877-12882(2002)

PubMed=21074045; DOI=10.1016/j.cell.2010.10.016
Marchetto M.C.N., Carromeu C., Acab A., Yu D.X., Yeo G.W., Mu Y.-L., Chen G., Gage F.H., Muotri A.R.
A model for neural development and treatment of Rett syndrome using human induced pluripotent stem cells.
Cell 143:527-539(2010)

PubMed=21490598; DOI=10.1038/nature09915
Brennand K.J., Simone A., Jou J., Gelboin-Burkhart C., Tran N., Sangar S., Li Y., Mu Y.-L., Chen G., Yu D.X., McCarthy S.E., Sebat J., Gage F.H.
Modelling schizophrenia using human induced pluripotent stem cells.
Nature 473:221-225(2011)

PubMed=22720000; DOI=10.1371/journal.pone.0038958
Marotta M., Piontkivska H., Tanaka H.
Molecular trajectories leading to the alternative fates of duplicate genes.
PLoS ONE 7:E38958-E38958(2012)

PubMed=23325432; DOI=10.1101/gr.147942.112
Varley K.E., Gertz J., Bowling K.M., Parker S.L., Reddy T.E., Pauli-Behn F., Cross M.K., Williams B.A., Stamatoyannopoulos J.A., Crawford G.E., Absher D.M., Wold B.J., Myers R.M.
Dynamic DNA methylation across diverse human cell lines and tissues.
Genome Res. 23:555-567(2013)

Cross-references
Cell line collections (Providers) Coriell; AG09319
Cell line databases/resources CLO; CLO_0021754
Biological sample resources ENCODE; ENCBS037NAC
ENCODE; ENCBS443ENC
ENCODE; ENCBS697FJI
ENCODE; ENCBS992UXD
Encyclopedic resources Wikidata; Q54742872
Gene expression databases GEO; GSM510536
GEO; GSM510538
GEO; GSM525415
GEO; GSM525416
GEO; GSM525417
GEO; GSM749671
GEO; GSM749723
GEO; GSM749728
GEO; GSM945166
GEO; GSM945173
Entry history
Entry creation06-May-2013
Last entry update29-Jun-2023
Version number17