Cellosaurus G-401 BAF47 (CVCL_QW55)

Cell line name G-401 BAF47
Synonyms G401 BAF47; G401_BAF47
Accession CVCL_QW55
Resource Identification Initiative To cite this cell line use: G-401 BAF47 (RRID:CVCL_QW55)
Comments Transfected with: HGNC; 11103; SMARCB1.
Omics: Deep RNAseq analysis.
Omics: H3K27ac ChIP-seq epigenome analysis.
Omics: H3K27me3 ChIP-seq epigenome analysis.
Omics: H3K4me3 ChIP-seq epigenome analysis.
Disease Rhabdoid tumor of the kidney (NCIt: C8715)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_0270 (G-401)
Sex of cell Male
Age at sampling 3M
Category Cancer cell line
Publications

PubMed=28945250; DOI=10.1038/ng.3958
Nakayama R.T., Pulice J.L., Valencia A.M., McBride M.J., McKenzie Z.M., Gillespie M.A., Ku W.L., Teng M., Cui K., Williams R.T., Cassel S.H., Qing H., Widmer C.J., Demetri G.D., Irizarry R.A., Zhao K., Ranish J.A., Kadoch C.
SMARCB1 is required for widespread BAF complex-mediated activation of enhancers and bivalent promoters.
Nat. Genet. 49:1613-1623(2017)

Cross-references
Gene expression databases GEO; GSM2409664
GEO; GSM2409665
GEO; GSM2409666
GEO; GSM2409667
GEO; GSM2409668
GEO; GSM2409669
GEO; GSM2787353