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Cellosaurus SNU-1958 (CVCL_T040)

[Text version]
Cell line name SNU-1958
Accession CVCL_T040
Resource Identification Initiative To cite this cell line use: SNU-1958 (RRID:CVCL_T040)
Comments Problematic cell line: Contaminated. Shown to be a LS513 derivative (ICLAC). Originally thought to originate from the ascitic fluid of a 55 year old female patient with triple-negative breast carcinoma.
Part of: Seoul National University (SNU) cell line collection.
Registration: International Cell Line Authentication Committee, Register of Misidentified Cell Lines; ICLAC-00539.
Population: Caucasian.
Doubling time: 53 hours (PubMed=24141649).
Misspelling: SNU-1598; Cosmic=2068087.
Derived from site: In situ; Intestine, ileocecal valve; UBERON=UBERON_0000569.
Sequence variations
  • Mutation; HGNC; 2514; CTNNB1; Simple; p.Ala5_Ala80del (c.14_241del228); Zygosity=Homozygous (from parent cell line).
  • Mutation; HGNC; 6407; KRAS; Simple; p.Gly12Asp (c.35G>A); ClinVar=VCV000012582; Zygosity=Heterozygous (from parent cell line).
  • Mutation; HGNC; 11998; TP53; None_reported; -; Zygosity=- (from parent cell line).
Disease Cecum adenocarcinoma (NCIt: C5543)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_1386 (LS513)
Sex of cell Male
Age at sampling 63Y
Category Cancer cell line
STR profile Source(s): KCLB; PubMed=24141649

Markers:
AmelogeninX
CSF1PO10,13
D3S135815
D5S8189,11
D7S8208,11
D13S3179,10
FGA19,21
TPOX8
vWA16,17

Run an STR similarity search on this cell line
Web pages https://iclac.org/wp-content/uploads/Cross-Contaminations_v12_distribution.xlsx
Publications

PubMed=24141649; DOI=10.3892/ijo.2013.2144
Ku J.-L., Park S.-C., Kim K.-H., Jeon Y.-K., Kim S.-H., Shin Y.-K., Noh D.-Y., Im S.-A., Bang Y.-J., Han W., Kim W.-H., Park J.-G.
Establishment and characterization of seven human breast cancer cell lines including two triple-negative cell lines.
Int. J. Oncol. 43:2073-2081(2013)

Cross-references
Cell line collections (Providers) KCLB; 01958
Cell line databases/resources cancercelllines; CVCL_T040
Encyclopedic resources Wikidata; Q54955142
Polymorphism and mutation databases Cosmic; 2068087
Entry history
Entry creation03-Feb-2014
Last entry update05-Oct-2023
Version number20