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Cellosaurus AP39P (CVCL_XD42)

Cell line name AP39P
Synonyms N0611
Accession CVCL_XD42
Resource Identification Initiative To cite this cell line use: AP39P (RRID:CVCL_XD42)
Comments Population: Japanese.
Derived from site: In situ; Skin; UBERON=UBERON_0002097.
Cell type: Fibroblast of skin; CL=CL_0002620.
Sequence variations
  • Mutation; HGNC; 253; ADH5; Simple; c.564+1G>A (p.Leu188Profs*4); ClinVar=VCV000995826; Zygosity=Heterozygous; Note=Splice donor mutation (PubMed=33355142).
  • Mutation; HGNC; 253; ADH5; Simple; p.Ala278Pro (c.832G>C); ClinVar=VCV000995827; Zygosity=Heterozygous (PubMed=33355142).
  • Mutation; HGNC; 404; ALDH2; Simple; p.Glu504Lys (c.1510G>A) (p.Glu487Lys); ClinVar=VCV000018390; Zygosity=Heterozygous; Note=Allele ALDH2*2 (PubMed=33355142).
Disease AMeD syndrome (NCIt: C185246)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_B5M2 (AP39P-iPSC#1)CVCL_B5M4 (AP39P-iPSC#2)CVCL_XD43 (AP39P(SVT))
Originate from same individual CVCL_XD44 ! AP39P(L)
Sex of cell Female
Age at sampling 10Y
Category Finite cell line
STR profile Source(s): JCRB

Markers:
AmelogeninX
CSF1PO11,12
D5S8189,11
D7S8209,10
D13S31710,12
D16S53910,12
TH016,9
TPOX8,11
vWA16,17

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Publications

PubMed=33355142; DOI=10.1126/sciadv.abd7197
Oka Y., Hamada M., Nakazawa Y., Muramatsu H., Okuno Y., Higasa K., Shimada M., Takeshima H., Hanada K., Hirano T., Kawakita T., Sakaguchi H., Ichimura T., Ozono S., Yuge K., Watanabe Y., Kotani Y., Yamane M., Kasugai Y., Tanaka M., Suganami T., Nakada S., Mitsutake N., Hara Y., Kato K., Mizuno S., Miyake N., Kawai Y., Tokunaga K., Nagasaki M., Kito S., Isoyama K., Onodera M., Kaneko H., Matsumoto N., Matsuda F., Matsuo K., Takahashi Y., Mashimo T., Kojima S., Ogi T.
Digenic mutations in ALDH2 and ADH5 impair formaldehyde clearance and cause a multisystem disorder, AMeD syndrome.
Sci. Adv. 6:eabd7197.1-eabd7197.15(2020)

PubMed=33512438; DOI=10.1182/blood.2020009111
Mu A.-F., Hira A., Niwa A., Osawa M., Yoshida K., Mori M., Okamoto Y., Inoue K., Kondo K., Kanemaki M.T., Matsuda T., Ito E., Kojima S., Nakahata T., Ogawa S., Tanaka K., Matsuo K., Saito M.K., Takata M.
Analysis of disease model iPSCs derived from patients with a novel Fanconi anemia-like IBMFS ADH5/ALDH2 deficiency.
Blood 137:2021-2032(2021)

Cross-references
Cell line collections (Providers) JCRB; JCRB3068
JCRB; KURB1642
Encyclopedic resources Wikidata; Q93325548
Entry history
Entry creation06-Sep-2019
Last entry update29-Jun-2023
Version number7