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Cellosaurus HCT116-SN6 (CVCL_Y554)

Cell line name HCT116-SN6
Accession CVCL_Y554
Resource Identification Initiative To cite this cell line use: HCT116-SN6 (RRID:CVCL_Y554)
Comments Population: Caucasian.
Doubling time: 31.7 hours (PubMed=21619602).
Selected for resistance to: ChEBI; CHEBI:8988; SN-38 (7-ethyl-10-hydroxy-camptothecin).
Omics: Transcriptome analysis by microarray.
Derived from site: In situ; Colon; UBERON=UBERON_0001155.
Sequence variations
  • Mutation; HGNC; 173; ACVR2A; Simple; p.Lys437Argfs*5 (c.1310delA); dbSNP=rs764719749; Zygosity=Homozygous (from parent cell line).
  • Mutation; HGNC; 1101; BRCA2; Simple; p.Ile2675Aspfs*6 (c.8021dupA) (c.8021_8022insA); ClinVar=VCV000267050; Zygosity=Heterozygous (from parent cell line).
  • Mutation; HGNC; 1787; CDKN2A; Simple; p.Arg24Serfs*20 (c.68dupG) (c.68_69insG) (p.G23fs); Zygosity=Heterozygous (from parent cell line).
  • Mutation; HGNC; 2514; CTNNB1; Simple; p.Ser45del (c.133_135delTCT); ClinVar=VCV000017576; Zygosity=Heterozygous (from parent cell line).
  • Mutation; HGNC; 3373; EP300; Simple; p.Met1470Cysfs*22 (c.4408delA); Zygosity=Heterozygous (from parent cell line).
  • Mutation; HGNC; 3373; EP300; Simple; p.Asn1700Thrfs*9 (c.5099delA); Zygosity=Heterozygous (from parent cell line).
  • Mutation; HGNC; 6407; KRAS; Simple; p.Gly13Asp (c.38G>A); ClinVar=VCV000012580; Zygosity=Heterozygous (from parent cell line).
  • Mutation; HGNC; 8975; PIK3CA; Simple; p.His1047Arg (c.3140A>G); ClinVar=VCV000013652; Zygosity=Heterozygous (from parent cell line).
  • Mutation; HGNC; 9277; PPM1D; Simple; p.Leu450Ter (c.1349delT) (p.Leu450fs) (c.1344delT); Zygosity=Heterozygous (from parent cell line).
  • Mutation; HGNC; 11773; TGFBR2; Simple; p.Lys128Serfs*35 (c.383delA); ClinVar=VCV000477546; Zygosity=Homozygous (from parent cell line).
  • Mutation; HGNC; 11986; TOP1; Simple; p.Arg621His (c.1862G>A); Zygosity=Heterozygous (PubMed=21619602).
  • Mutation; HGNC; 11986; TOP1; Simple; p.Glu710Gly (c.2129A>G); Zygosity=Heterozygous (PubMed=21619602).
Disease Colon carcinoma (NCIt: C4910)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_B7PT (HCT116-s)
Sex of cell Male
Age at sampling 48Y
Category Cancer cell line
Publications

PubMed=15027118; DOI=10.1002/ijc.20032
Candeil L., Gourdier I., Peyron D., Vezzio-Vie N., Copois V., Bibeau F., Orsetti B., Scheffer G.L., Ychou M., Khan Q.A., Pommier Y., Pau B., Martineau P., Del Rio M.
ABCG2 overexpression in colon cancer cells resistant to SN38 and in irinotecan-treated metastases.
Int. J. Cancer 109:848-854(2004)

PubMed=18340113; DOI=10.4161/cbt.7.6.5838
Gongora C., Candeil L., Vezzio-Vie N., Copois V., Denis V., Bareil C., Molina F., Fraslon C., Conseiller E., Pau B., Martineau P., Del Rio M.
Altered expression of cell proliferation-related and interferon-stimulated genes in colon cancer cells resistant to SN38.
Cancer Biol. Ther. 7:822-832(2008)

PubMed=21619602; DOI=10.1186/1476-4598-10-64
Gongora C., Vezzio-Vie N., Tuduri S., Denis V., Causse A., Auzanneau C., Collod-Beroud G., Coquelle A., Pasero P., Pourquier P., Martineau P., Del Rio M.
New topoisomerase I mutations are associated with resistance to camptothecin.
Mol. Cancer 10:64.1-64.13(2011)

Cross-references
Cell line databases/resources cancercelllines; CVCL_Y554
Encyclopedic resources Wikidata; Q54882061
Entry history
Entry creation07-Nov-2014
Last entry update05-Oct-2023
Version number15