Variant position: 989 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1487 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human GPPGPQGLAGQRGIVGLPGQ RGERGFPGLPGPSGEPGKQGA
Mouse GPPGPQGLAGQRGIVGLPGQ RGERGFPGLPGPSGEPGKQGA
Rat GPPGPQGLAGQRGIVGLPGQ RGERGFPGLPGPSGEPGKQGA
Bovine GPPGPQGLAGQRGIVGLPGQ RGERGFPGLPGPSGEPGKQGA
Xenopus laevis GPPGPQGLSGQRGIVGLPGQ RGERGFPGLPGPSGEPGKQGG
Xenopus tropicalis GPPGPQGLSGQRGIVGLPGQ RGERGFPGLPGPSGEPGKQGG
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
182 – 1241 Collagen alpha-1(II) chain
97 – 1237 Disordered
201 – 1214 Triple-helical region
1 – 1219 Missing. In isoform 3.
Characterization of an arginine 789 to cysteine substitution in alpha 1 (II) collagen chains of a patient with spondyloepiphyseal dysplasia.
Chan D.; Taylor T.K.F.; Cole W.G.;
J. Biol. Chem. 268:15238-15245(1993)
Cited for: VARIANT SEDC CYS-989;
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