Variant position: 1053 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1487 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human EPGREGSPGADGPPGRDGAA GVKGDRGETGAVGAPGAPGPP
Mouse EPGREGSPGADGPPGRDGAA GVKGDRGETGALGAPGAPGPP
Rat EPGREGSPGADGPPGRDGAA GVKGDRGETGALGAPGAPGPP
Bovine EPGREGSPGADGPPGRDGAA GVKGDRGETGAVGAPGAPGPP
Xenopus laevis EPGREGNPGSDGPPGRDGAT GIKGDRGETGPLGAPGAPGAP
Xenopus tropicalis EPGREGNAGSDGPPGRDGAT GIKGDRGETGPLGAPGAPGAP
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
182 – 1241 Collagen alpha-1(II) chain
97 – 1237 Disordered
201 – 1214 Triple-helical region
1 – 1219 Missing. In isoform 3.
An amino acid substitution (Gly853-->Glu) in the collagen alpha 1(II) chain produces hypochondrogenesis.
Bogaert R.; Tiller G.E.; Wies M.A.; Gruber H.E.; Rimoin D.L.; Cohn D.H.; Eyre D.R.;
J. Biol. Chem. 267:22522-22526(1992)
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1038-1055 (ISOFORMS 1/2); VARIANT HYPOCHONDROGENESIS GLU-1053;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.