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UniProtKB/Swiss-Prot Q05066: Variant p.Arg133Trp

Sex-determining region Y protein
Gene: SRY
Variant information

Variant position:  133
The position of the amino-acid change on the UniProtKB canonical protein sequence.

Type of variant:  LP/P [Disclaimer]
The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance

Residue change:  From Arginine (R) to Tryptophan (W) at position 133 (R133W, p.Arg133Trp).
Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.

Physico-chemical properties:  Change from large size and basic (R) to large size and aromatic (W)
The physico-chemical property of the reference and variant residues and the change implicated.

BLOSUM score:  -3
The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page

Variant description:  In SRXY1.
Any additional useful information about the variant.

Other resources:  
Links to websites of interest for the variant.



Sequence information

Variant position:  133
The position of the amino-acid change on the UniProtKB canonical protein sequence.

Protein sequence length:  204
The length of the canonical sequence.

Location on the sequence:   AQKLQAMHREKYPNYKYRPR  R KAKMLPKNCSLLPADPASVL
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.

Residue conservation: 
The multiple alignment of the region surrounding the variant against various orthologous sequences.

Human                         AQKLQAMHREKYPNYKYRPRRKAKMLPKNCSLLPADPASVL

Gorilla                       AQKLQAMHREKYPNYKYRPRRKAKMLPKNCSLLPADPASVL

                              AQRLQAMHREKYPDYKYRPRRKAT-AQKSHKLLPAASSSML

Rhesus macaque                AQKLQAMHREKYPNYKYRPRRKAKMLQNSCSLLPADPSSVP

Chimpanzee                    AQKLQAMHREKYPNYKYRPRRKANMLPKNCSLLPADPASVL

Mouse                         AQRLKILHREKYPNYKYQPHRRAKVSQRSGILQPAVASTKL

Rat                           AQRLKTLHREKYPNYKYQPHRRVKVPQRSYTLQREVASTKL

Pig                           AQRLQAVHRDKYPGYKYRPRRKG---ERAQNLLPAE-AAVL

Bovine                        AQRLLAIHRDKYPGYKYRPRRRAKRPQKS---LPAD-SSIL

Goat                          AQRLLAIHRDKYPGYKYRPRRKAKRPQKS---LDAD-SPIL

Sheep                         AQRLLAIHRDKYPGYKYRPRRKAKRPQKS---LAAD-SSIL

Cat                           AQRLQALHREKYPGYRYRPRRKAR-PEKSDKLPPADASSTL

Horse                         AQRLRAMHQEKYPDYKYRPRRKAKMPQKSDKPLPQT-PLLH

Sequence annotation in neighborhood:  
The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.

TypePositionsDescription
Chain 1 – 204 Sex-determining region Y protein
Region 59 – 136 Sufficient for interaction with KPNB1
Region 107 – 139 Sufficient for interaction with EP300
Region 130 – 136 Required for nuclear localization
Modified residue 136 – 136 N6-acetyllysine
Mutagenesis 115 – 115 K -> R. Does not abolish acetylation activity.
Mutagenesis 123 – 123 K -> R. Does not abolish acetylation.
Mutagenesis 128 – 128 K -> R. Does not abolish acetylation.
Mutagenesis 133 – 133 R -> W. Reduces nuclear localization. Strongly reduces nuclear localization; when associated with G-62. Reduces interaction with KPNB1. Does not reduce interaction with CAML. Does not abolish DNA-binding.
Mutagenesis 134 – 134 K -> R. Does not abolish acetylation.
Mutagenesis 136 – 136 K -> R. Abolishes acetylation. Does not abolish interaction with EP300. Does not abolish DNA-binding. Enhances cytoplasmic localization. Abolishes interaction with KPNB1.


Literature citations

Analysis of the SRY gene in 22 sex-reversed XY females identifies four new point mutations in the conserved DNA binding domain.
Affara N.A.; Chalmers I.J.; Ferguson-Smith M.A.;
Hum. Mol. Genet. 2:785-789(1993)
Cited for: VARIANTS SRXY1 GLY-62; THR-78 AND TRP-133;

Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.