UniProtKB/Swiss-Prot P10916 : Variant p.Glu22Lys
Myosin regulatory light chain 2, ventricular/cardiac muscle isoform
Gene: MYL2
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Variant information
Variant position:
22
The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant:
LP/P [Disclaimer : Variants classification is intended for research purposes only, not for clinical and diagnostic use . The label disease variant is assigned according to literature reports on probable disease-association that can be based on theoretical reasons. This label must not be considered as a definitive proof for the pathogenic role of a variant. ]
The variants are classified into three categories: LP/P, LB/B and US.LP/P: likely pathogenic or pathogenic. LB/B: likely benign or benign. US: uncertain significance
Residue change:
From Glutamate (E) to Lysine (K) at position 22 (E22K, p.Glu22Lys).
Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties:
Change from medium size and acidic (E) to large size and basic (K)
The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score:
1
The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another: Lowest score: -4 (low probability of substitution).Highest score: 11 (high probability of substitution). More information can be found on the following page
Variant description:
In CMH10; some patients present with mid-left ventricular chamber thickening; significantly decrease calcium binding affinity; loss of phosphorylation.
Any additional useful information about the variant.
Other resources:
Links to websites of interest for the variant.
Sequence information
Variant position:
22
The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length:
166
The length of the canonical sequence.
Location on the sequence:
APKKAKKRAGGANSNVFSMF
E QTQIQEFKEAFTIMDQNRDG
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation:
The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human APKKAKKRAGGANSNVFSMFE QTQIQEFKEAFTIMDQNRDG
Mouse APKKAKKRIEGGSSNVFSMFE QTQIQEFKEAFTIMDQNRDG
Rat SPKKAKKRLEGGSSNVFSMFE QTQIQEFKEAFTIMDQNRDG
Bovine SPKKAKKRAEGANYNVFSMFE QTQIQEFKEAFTIMDQNRDG
Rabbit SPKKAKKRAEGANSNVFSMFE QTQIQEFKEAFTIMDQNRDG
Sequence annotation in neighborhood:
The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
2 – 166
Myosin regulatory light chain 2, ventricular/cardiac muscle isoform
Binding site
37 – 37
Binding site
39 – 39
Binding site
41 – 41
Modified residue
2 – 2
N,N,N-trimethylalanine
Modified residue
14 – 14
Deamidated asparagine
Modified residue
15 – 15
Phosphoserine; by ZIPK/DAPK3
Modified residue
19 – 19
Phosphoserine
Literature citations
Mutations in either the essential or regulatory light chains of myosin are associated with a rare myopathy in human heart and skeletal muscle.
Poetter K.; Jiang H.; Hassanzadeh S.; Master S.R.; Chang A.; Dalakas M.C.; Rayment I.; Sellers J.R.; Fananapazir L.; Epstein N.D.;
Nat. Genet. 13:63-69(1996)
Cited for: VARIANTS CMH10 THR-13; LYS-22 AND ALA-95;
Familial hypertrophic cardiomyopathy mutations in the regulatory light chains of myosin affect their structure, Ca2+ binding, and phosphorylation.
Szczesna D.; Ghosh D.; Li Q.; Gomes A.V.; Guzman G.; Arana C.; Zhi G.; Stull J.T.; Potter J.D.;
J. Biol. Chem. 276:7086-7092(2001)
Cited for: VARIANTS CMH10 THR-13; LEU-18; LYS-22; GLN-58 AND ALA-95; CHARACTERIZATION OF VARIANTS CMH10 THR-13; LEU-18; LYS-22; GLN-58 AND ALA-95;
Systematic analysis of the regulatory and essential myosin light chain genes: genetic variants and mutations in hypertrophic cardiomyopathy.
Kabaeva Z.T.; Perrot A.; Wolter B.; Dietz R.; Cardim N.; Correia J.M.; Schulte H.D.; Aldashev A.A.; Mirrakhimov M.M.; Osterziel K.J.;
Eur. J. Hum. Genet. 10:741-748(2002)
Cited for: VARIANTS CMH10 LYS-22 AND GLN-58;
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.