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UniProtKB/Swiss-Prot P03886: Variant p.Leu285Pro

NADH-ubiquinone oxidoreductase chain 1
Gene: MT-ND1
Variant information

Variant position:  285
The position of the amino-acid change on the UniProtKB canonical protein sequence.

Type of variant:  Unclassified
The variants are classified into three categories: Disease, Polymorphism and Unclassified.
  • Disease: Variants implicated in disease according to literature reports.
  • Polymorphism: Variants not reported to be implicated in disease.
  • Unclassified: Variants with uncertain implication in disease according to literature reports. Evidence against or in favor of a pathogenic role is limited and/or conflicting.

Residue change:  From Leucine (L) to Proline (P) at position 285 (L285P, p.Leu285Pro).
Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.

Physico-chemical properties:  Similar physico-chemical property. Both residues are medium size and hydrophobic.
The physico-chemical property of the reference and variant residues and the change implicated.

BLOSUM score:  -3
The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page

Involvement in disease:  Leber hereditary optic neuropathy (LHON) [MIM:535000]: A maternally inherited disease resulting in acute or subacute loss of central vision, due to optic nerve dysfunction. Cardiac conduction defects and neurological defects have also been described in some patients. LHON results from primary mitochondrial DNA mutations affecting the respiratory chain complexes. {ECO:0000269|PubMed:1417830, ECO:0000269|PubMed:1674640, ECO:0000269|PubMed:1900003, ECO:0000269|PubMed:1928099, ECO:0000269|PubMed:1959619, ECO:0000269|PubMed:2018041}. Note=The disease is caused by mutations affecting the gene represented in this entry.
The name and a short description of the disease associated with the variant. For more information about the disease, the user can refer to OMIM, following the link provided after the disease acronym.

Variant description:  In LHON; secondary mutation; unknown pathological significance.
Any additional useful information about the variant.

Other resources:  
Links to websites of interest for the variant.



Sequence information

Variant position:  285
The position of the amino-acid change on the UniProtKB canonical protein sequence.

Protein sequence length:  318
The length of the canonical sequence.

Location on the sequence:   LLTSLFLWIRTAYPRFRYDQ  L MHLLWKNFLPLTLALLMWYV
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.

Residue conservation: 
The multiple alignment of the region surrounding the variant against various orthologous sequences.

Human                         LLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLALLMWYV

Gorilla                       LLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLALLMWYI

                              LLTICFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHV

Chimpanzee                    LLTSLFLWIRTAYPRFRYDQLMHLLWKNFLPLTLASLMWYI

Mouse                         LLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHI

Rat                           LLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWYI

Pig                           ALTITFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHI

Bovine                        LLTMSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHV

Rabbit                        LLTMTFLWIRASYPRFRYDQLMHLLWKSFLPLTLALCMWHI

Sheep                         LLSITFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHV

Cat                           LLTTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHV

Horse                         LLTCSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHV

Chicken                       LLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHT

Xenopus laevis                ILSMIFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTLWHI

Zebrafish                     MLSILFLWMRASYPRFRYDQLMHLIWKNFLPITLVLVLWHI

Caenorhabditis elegans        SL---LIFIRSSYPRYRYDLMMSLFWFKLLPISLIMLCFYA

Drosophila                    FISFVFIWVRGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFI

Slime mold                    GMLCSFIWVRATLPRYRYDQLMYLGWKSLLPFALLIYIGVI

Sequence annotation in neighborhood:  
The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.

TypePositionsDescription
Chain 1 – 318 NADH-ubiquinone oxidoreductase chain 1


Literature citations

Leber hereditary optic neuropathy: involvement of the mitochondrial ND1 gene and evidence for an intragenic suppressor mutation.
Howell N.; Kubacka I.; Xu M.; McCullough D.A.;
Am. J. Hum. Genet. 48:935-942(1991)
Cited for: VARIANT LHON PRO-285; VARIANT CYS-277;

Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.