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UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot P03923: Variant p.Ala72Val

NADH-ubiquinone oxidoreductase chain 6
Gene: MT-ND6
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Variant information Variant position: help 72 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: help LP/P [Disclaimer] The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance
Residue change: help From Alanine (A) to Valine (V) at position 72 (A72V, p.Ala72Val). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: help Change from small size and hydrophobic (A) to medium size and hydrophobic (V) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: help 0 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page
Variant description: help In LDYT; most severe mutation with no vision recovery. Any additional useful information about the variant.
Other resources: help Links to websites of interest for the variant.


Sequence information Variant position: help 72 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: help 174 The length of the canonical sequence.
Location on the sequence: help GLMVFLIYLGGMMVVFGYTT A MAIEEYPEAWGSGVEVLVSV The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: help The multiple alignment of the region surrounding the variant against various orthologous sequences. 
Human                         GLMVFLIYLGGMMVVFGYTTAMAIEEYPE-----AWGSGVEVLVSV

Gorilla                       GLMVFLIYLGGMMVVFGYTTAMAIGEYPE-----AWGSGVE

                              GLMVFLIYLGGMLVVFGYTTAMATEQYPE-----VWVSNKA

Chimpanzee                    GLMVFLIYLGGMMVVFGYTTAMAIEEYPE-----AWGSGVE

Mouse                         GLMVFLIYLGGMLVVFGYTTAMATEEYPE-----TWGSNWL

Rat                           GLMVFLIYLGGMLVVFGYTTAMATEEYPE-----TWGSNWF

Pig                           GLMVFLIYLGGMLVVFGYTTAMATEMYPE-----VWVSNKT

Bovine                        GLMVFLIYLGGMMVVFGYTTAMATEQYPE-----IWLSNKA

Rabbit                        GLMMFLIYLGGMLVVFGYTTAMATEEYPE-----TWGSNVM

Sheep                         GLMVFLIYLGGMMVVFGYTTAMATEQYPE-----VWVSNKV

Cat                           GLMVFLIYLGGMLVVFGYTTAMATEPYPE-----AWTSNKA

Horse                         GLMVFLIYLGGMLVVFGYTTAMATEQYPE-----VWVSNTT

Chicken                       SLALFLVYLGGMLVVFVYSVSLAADPYPE-----AWG-DWR

Xenopus laevis                SIVLFLIYLGGMLVVFAYSAARA-KPYPE-----AWGS-WS

Zebrafish                     SLILFLIYLGGMLVVFAYSAALAAEPFPE-----AWGDRVV

Caenorhabditis elegans        SYFICLLFLSGIFVILVYFSSL---------------SKIN

Drosophila                    SYILFLIFLGGMLVLFIYVTSLASNEMFNLSMKLTLFSSLI

Slime mold                    ACIYILVNVGAIAVLFLFIVMMININIVE-----IQETMKK
Sequence annotation in neighborhood: help The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.
TypePositionsDescription
Chain 1 – 174 NADH-ubiquinone oxidoreductase chain 6



Literature citations
A mitochondrial DNA mutation at nucleotide pair 14459 of the NADH dehydrogenase subunit 6 gene associated with maternally inherited Leber hereditary optic neuropathy and dystonia.
Jun A.S.; Brown M.D.; Wallace D.C.;
Proc. Natl. Acad. Sci. U.S.A. 91:6206-6210(1994)
Cited for: VARIANT LDYT VAL-72;
Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.