Variant position: 334 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 438 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human SHAQQYRWYQMLYQAGVFAS RSSLRCCRIRFTWALALLQCL
Mouse SHAQQYRWYQMLYQAGVFAS RSSLQCCRIRFTWVLALLQCL
Slime mold FIANAFAIFSFCYQLGVLIS RSSLQFVKIKHIGVITILQGI
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 435 Battenin
299 – 346 Lumenal
322 – 438 Missing. In isoform 4.
CLN3 protein regulates lysosomal pH and alters intracellular processing of Alzheimer's amyloid-beta protein precursor and cathepsin D in human cells.
Golabek A.A.; Kida E.; Walus M.; Kaczmarski W.; Michalewski M.; Wisniewski K.E.;
Mol. Genet. Metab. 70:203-213(2000)
Cited for: SUBCELLULAR LOCATION; GLYCOSYLATION; CHARACTERIZATION OF VARIANT CLN3 CYS-334;
Spectrum of mutations in the Batten disease gene, CLN3.
Munroe P.B.; Mitchison H.M.; O'Rawe A.M.; Anderson J.W.; Boustany R.-M.N.; Lerner T.J.; Taschner P.E.M.; de Vos N.; Breuning M.H.; Gardiner R.M.; Mole S.E.;
Am. J. Hum. Genet. 61:310-316(1997)
Cited for: VARIANTS CLN3 PRO-101; PRO-170; LYS-295; PHE-330; CYS-334 AND HIS-334;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.