Sequence information
Variant position: 92 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 159 The length of the canonical sequence.
Location on the sequence:
VSVLLLGLLPAAYLNPCSAM
D YSLAAALTLHGHWGLGQVVT
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human VSVLLLG--LLPAAYLNPCSA---MD YSLAAALTLHGHWGLGQVVT
Mouse VSVLLLG--LIPAGYLNPCSV---VD YSLAAALTLHSHWGL
Rat VSVLLLG--LIPAGYLNPCSV---VD YSLAAALTLHSHWGI
Pig VSVLLLG--LLPAAYLNPCSA---MD YSLAAALTLHGHWGI
Bovine VSVLLLG--LIPAAYLNPCSA---MD YSLAATLTLHSHWGI
Sheep VSVLLLG--LIPAAYLNPCSA---MD YSLAATLTLHSHWGI
Chicken VSALLLG--LLPAAYLYPGPA---VD YSLAAALTLHGHWGL
Xenopus tropicalis LSVALLG--LLPAAYLYPGAA---MD YSLAAALTLHGHWGL
Caenorhabditis elegans WAVGMLP--ILPASYFIHGPV---MD AVLTVALTLHIHWGI
Drosophila VSAGLLA--VIPAAFIAPSQV---LD ALMAISVVIHTHWGV
Baker's yeast FALSVVP--LATTAMLTTGPLSTAAD SFFSVMLLGYCYMEF
Fission yeast IAIAMVPQVMIPLFTGTSHPL---MD AALACTLITHAHLGF
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
57 – 159
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial
Transmembrane
91 – 111
Helical
Metal binding
102 – 102
Iron (heme axial ligand); shared with SDHC
Alternative sequence
56 – 158
HSGSKAASLHWTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVHGDALQKAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK -> HWALDKLLLTMFMGMPCRKLPRQGFWHFQ. In isoform 3.
Literature citations
Mutations in SDHD, a mitochondrial complex II gene, in hereditary paraganglioma.
Baysal B.E.; Ferrell R.E.; Willett-Brozick J.E.; Lawrence E.C.; Myssiorek D.; Bosch A.; van der Mey A.; Taschner P.E.M.; Rubinstein W.S.; Myers E.N.; Richard C.W. III; Cornelisse C.J.; Devilee P.; Devlin B.;
Science 287:848-851(2000)
Cited for: VARIANTS PGL1 LEU-81; TYR-92 AND LEU-102;
Nearly all hereditary paragangliomas in the Netherlands are caused by two founder mutations in the SDHD gene.
Taschner P.E.M.; Jansen J.C.; Baysal B.E.; Bosch A.; Rosenberg E.H.; Broecker-Vriends A.H.J.T.; van Der Mey A.G.L.; van Ommen G.-J.B.; Cornelisse C.J.; Devilee P.;
Genes Chromosomes Cancer 31:274-281(2001)
Cited for: VARIANTS PGL1 TYR-92 AND PRO-139;
Germ-line mutations in nonsyndromic pheochromocytoma.
Neumann H.P.H.; Bausch B.; McWhinney S.R.; Bender B.U.; Gimm O.; Franke G.; Schipper J.; Klisch J.; Altehoefer C.; Zerres K.; Januszewicz A.; Smith W.M.; Munk R.; Manz T.; Glaesker S.; Apel T.W.; Treier M.; Reineke M.; Walz M.K.; Hoang-Vu C.; Brauckhoff M.; Klein-Franke A.; Klose P.; Schmidt H.; Maier-Woelfle M.; Peczkowska M.; Szmigielski C.; Eng C.;
N. Engl. J. Med. 346:1459-1466(2002)
Cited for: VARIANT PHEOCHROMOCYTOMA TYR-92;
Distinct clinical features of paraganglioma syndromes associated with SDHB and SDHD gene mutations.
Neumann H.P.H.; Pawlu C.; Peczkowska M.; Bausch B.; McWhinney S.R.; Muresan M.; Buchta M.; Franke G.; Klisch J.; Bley T.A.; Hoegerle S.; Boedeker C.C.; Opocher G.; Schipper J.; Januszewicz A.; Eng C.;
JAMA 292:943-951(2004)
Cited for: VARIANTS PGL1 LEU-81; CYS-114 AND VAL-148; VARIANT PHEOCHROMOCYTOMA TYR-92;
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.