Sequence information
Variant position: 402 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 514 The length of the canonical sequence.
Location on the sequence:
LGPKASQKKLMIKQGLLDKH
G KPTDSTPATWKQEYVDYSES
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human LGPKASQKKLMIKQGLLDKHG KPTDSTPATWKQEYVDYS-----------------ES
Mouse LGPKASQKKMMIKQGLLDKHG KPTDNTPATWKQDYIDYS--
Rat LGPKASQKKQLIKQGLLDKHG RPTDGTPASWTRDYVDYS--
Chicken LGPKASQKKMMIQKGLLDKHG KPNECTPDSWKKEYVDYR--
Caenorhabditis elegans LGPVASKKKQMVKDGLLDKFG KPNDTTPKSWAKEYVQTS--
Drosophila LGPKASAKKALIAAGKLDKFG RPNENTPKEWLTGYVDYN--
Slime mold LGPKAKVKKEMIKDGKLDKFG KPNEKTPSDWTNTYTYYTGQ
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
2 – 514
H/ACA ribonucleoprotein complex subunit DKC1
Modified residue
387 – 387
Phosphoserine
Cross
394 – 394
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)
Cross
413 – 413
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1); alternate
Cross
413 – 413
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate
Literature citations
X-linked dyskeratosis congenita is predominantly caused by missense mutations in the DKC1 gene.
Knight S.W.; Heiss N.S.; Vulliamy T.J.; Greschner S.; Stavrides G.; Pai G.S.; Lestringant G.; Varma N.; Mason P.J.; Dokal I.; Poustka A.;
Am. J. Hum. Genet. 65:50-58(1999)
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1); VARIANTS DKCX VAL-2; GLU-39; LYS-41; THR-65; ALA-66; VAL-321; ILE-350; THR-350; VAL-353 AND ARG-402;
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.